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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170231776
CEQH01278843
181905
Actinomycetota
CAT
Met
>WENV170230216
CEQH01013081
456078
Actinomycetota
TTG
Gln
>WENV170231002
CEQH01108717
177601
Actinomycetota
CAT
Met
>WENV170230701
CEQH01066192
366609
Actinomycetota
TTT
Lys
>WENV170230884
CEQH01090525
366609
Actinomycetota
TTT
Lys
>WENV170231353
CEQH01150136
57288
Actinomycetota
TGA
Ser
>WENV170230324
CEQH01023582
486372
Actinomycetota
GCA
Cys
>WENV170231300
CEQH01144543
281633
Actinomycetota
CCA
Trp
>WENV170231366
CEQH01150581
30248
Actinomycetota
CGA
Ser
>WENV170231150
CEQH01127746
290385
Actinomycetota
CGT
Thr
>WENV170231379
CEQH01150737
286628
Actinomycetota
GTG
His
>WENV170230064
CEQH01000745
209510
Actinomycetota
GAT
Ile
>WENV170230139
CEQH01006697
75551
Actinomycetota
CAG
Leu
>WENV170230197
CEQH01011395
219754
Actinomycetota
CAT
Met
>WENV170231266
CEQH01140554
56361
Actinomycetota
GGA
Ser
>WENV170230621
CEQH01055104
286927
Actinomycetota
TCT
Arg
>WENV170230509
CEQH01043356
118175
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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