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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170278374
CERQ01086066
456078
Actinomycetota
TTG
Gln
>WENV170279088
CERQ01236497
456078
Actinomycetota
TTG
Gln
>WENV170278314
CERQ01078042
177601
Actinomycetota
CAT
Met
>WENV170277923
CERQ01037082
286398
Actinomycetota
GTT
Asn
>WENV170278825
CERQ01137786
366609
Actinomycetota
TTT
Lys
>WENV170279099
CERQ01239264
366609
Actinomycetota
TTT
Lys
>WENV170278710
CERQ01122169
57288
Actinomycetota
TGA
Ser
>WENV170278951
CERQ01195099
281633
Actinomycetota
CCA
Trp
>WENV170278282
CERQ01075088
20383
Actinomycetota
CGA
Ser
>WENV170278602
CERQ01115276
30248
Actinomycetota
CGA
Ser
>WENV170277722
CERQ01016698
286628
Actinomycetota
GTG
His
>WENV170277687
CERQ01013647
75551
Actinomycetota
CAG
Leu
>WENV170277874
CERQ01031726
219754
Actinomycetota
CAT
Met
>WENV170277705
CERQ01015360
131437
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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