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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170373132
CETS01171199
195667
Actinomycetota
GAT
Ile
>WENV170372223
CETS01073764
456078
Actinomycetota
TTG
Gln
>WENV170373193
CETS01198075
456078
Actinomycetota
TTG
Gln
>WENV170372614
CETS01115690
177601
Actinomycetota
CAT
Met
>WENV170373014
CETS01157298
177601
Actinomycetota
CAT
Met
>WENV170373268
CETS01233606
286772
Actinomycetota
TTC
Glu
>WENV170371361
CETS01005226
286398
Actinomycetota
GTT
Asn
>WENV170372245
CETS01075938
414769
Actinomycetota
CCT
Arg
>WENV170372328
CETS01084193
366609
Actinomycetota
TTT
Lys
>WENV170371310
CETS01002201
57288
Actinomycetota
TGA
Ser
>WENV170372219
CETS01073389
57288
Actinomycetota
TGA
Ser
>WENV170372999
CETS01155589
74688
Actinomycetota
CAG
Leu
>WENV170372326
CETS01083856
281633
Actinomycetota
CCA
Trp
>WENV170372503
CETS01103579
281633
Actinomycetota
CCA
Trp
>WENV170372702
CETS01125605
281633
Actinomycetota
CCA
Trp
>WENV170373343
CETS01256563
20383
Actinomycetota
CGA
Ser
>WENV170373092
CETS01161279
57196
Actinomycetota
GAG
Leu
>WENV170372254
CETS01077158
30248
Actinomycetota
CGA
Ser
>WENV170373070
CETS01160309
290385
Actinomycetota
CGT
Thr
>WENV170372169
CETS01069452
236563
Actinomycetota
CGG
Pro
>WENV170373123
CETS01167349
209510
Actinomycetota
GAT
Ile
>WENV170373458
CETS01287197
75551
Actinomycetota
CAG
Leu
>WENV170371423
CETS01010657
301953
Actinomycetota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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