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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170541679
CXPR01002376
481233
Actinomycetota
CCC
Gly
>WENV170541644
CXPR01000735
147829
Actinomycetota
TAA
Leu
>WENV170541697
CXPR01003632
280498
Actinomycetota
GTT
Asn
>WENV170541675
CXPR01002017
140768
Actinomycetota
TAG
Leu
>WENV170541689
CXPR01003100
176075
Actinomycetota
TCT
Arg
>WENV170541680
CXPR01002388
59689
Actinomycetota
GGA
Ser
>WENV170541725
CXPR01006027
59689
Actinomycetota
GGA
Ser
>WENV170541676
CXPR01002101
175837
Actinomycetota
ACG
Arg
>WENV170541677
CXPR01002101
175837
Actinomycetota
ACG
Arg
>WENV170541654
CXPR01001470
175837
Actinomycetota
ACG
Arg
>WENV170541660
CXPR01001721
280549
Actinomycetota
CAC
Val
>WENV170541669
CXPR01001770
280549
Actinomycetota
CAC
Val
>WENV170541655
CXPR01001507
20450
Actinomycetota
GAG
Leu
>WENV170541653
CXPR01001410
280702
Actinomycetota
GGC
Ala
>WENV170541685
CXPR01002862
176077
Actinomycetota
CAT
Met
>WENV170541652
CXPR01001403
398948
Actinomycetota
TTC
Glu
>WENV170541678
CXPR01002236
175949
Actinomycetota
CAT
Met
>WENV170541659
CXPR01001721
418252
Actinomycetota
GAC
Val
>WENV170541668
CXPR01001770
418252
Actinomycetota
GAC
Val
>WENV170541672
CXPR01001932
280703
Actinomycetota
CCT
Arg
>WENV170541650
CXPR01001367
280450
Actinomycetota
TTT
Lys
>WENV170541674
CXPR01002017
323758
Actinomycetota
CGT
Thr
>WENV170541649
CXPR01001224
56451
Actinomycetota
CGA
Ser
>WENV170541687
CXPR01002946
175843
Actinomycetota
CAA
Leu
>WENV170541688
CXPR01002949
317680
Actinomycetota
CCG
Arg
>WENV170541723
CXPR01005314
430848
Actinomycetota
CTG
Gln
>WENV170541722
CXPR01005314
289788
Actinomycetota
CTC
Glu
>WENV170541673
CXPR01001983
60767
Actinomycetota
TGA
Ser
>WENV170541681
CXPR01002455
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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