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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170541847
CXPT01000004
481233
Actinomycetota
CCC
Gly
>WENV170541856
CXPT01000013
147829
Actinomycetota
TAA
Leu
>WENV170541881
CXPT01000027
280498
Actinomycetota
GTT
Asn
>WENV170541884
CXPT01000033
280498
Actinomycetota
GTT
Asn
>WENV170541887
CXPT01000039
280498
Actinomycetota
GTT
Asn
>WENV170541898
CXPT01000107
280498
Actinomycetota
GTT
Asn
>WENV170541908
CXPT01000168
280498
Actinomycetota
GTT
Asn
>WENV170541863
CXPT01000019
140768
Actinomycetota
TAG
Leu
>WENV170541858
CXPT01000015
176075
Actinomycetota
TCT
Arg
>WENV170541860
CXPT01000018
175848
Actinomycetota
TGG
Pro
>WENV170541869
CXPT01000020
176078
Actinomycetota
GGG
Pro
>WENV170541855
CXPT01000013
59689
Actinomycetota
GGA
Ser
>WENV170541885
CXPT01000035
175837
Actinomycetota
ACG
Arg
>WENV170541890
CXPT01000040
175837
Actinomycetota
ACG
Arg
>WENV170541891
CXPT01000040
175837
Actinomycetota
ACG
Arg
>WENV170541899
CXPT01000109
175837
Actinomycetota
ACG
Arg
>WENV170541900
CXPT01000109
175837
Actinomycetota
ACG
Arg
>WENV170541839
CXPT01000002
29393
Actinomycetota
GCT
Ser
>WENV170541836
CXPT01000002
280549
Actinomycetota
CAC
Val
>WENV170541867
CXPT01000020
280549
Actinomycetota
CAC
Val
>WENV170541897
CXPT01000100
280549
Actinomycetota
CAC
Val
>WENV170541906
CXPT01000154
280549
Actinomycetota
CAC
Val
>WENV170541851
CXPT01000013
349164
Actinomycetota
CTC
Glu
>WENV170541849
CXPT01000006
20450
Actinomycetota
GAG
Leu
>WENV170541886
CXPT01000036
280702
Actinomycetota
GGC
Ala
>WENV170541888
CXPT01000040
280702
Actinomycetota
GGC
Ala
>WENV170541889
CXPT01000040
280702
Actinomycetota
GGC
Ala
>WENV170541902
CXPT01000118
280702
Actinomycetota
GGC
Ala
>WENV170541910
CXPT01000212
280702
Actinomycetota
GGC
Ala
>WENV170541845
CXPT01000003
176077
Actinomycetota
CAT
Met
>WENV170541880
CXPT01000025
280524
Actinomycetota
TGC
Ala
>WENV170541833
CXPT01000002
398948
Actinomycetota
TTC
Glu
>WENV170541837
CXPT01000002
117777
Actinomycetota
>WENV170541838
CXPT01000002
175949
Actinomycetota
CAT
Met
>WENV170541857
CXPT01000014
227544
Actinomycetota
TAC
Val
>WENV170541878
CXPT01000024
191955
Actinomycetota
TGT
Thr
>WENV170541882
CXPT01000028
280544
Actinomycetota
GTG
His
>WENV170541846
CXPT01000003
280703
Actinomycetota
CCT
Arg
>WENV170541853
CXPT01000013
280450
Actinomycetota
TTT
Lys
>WENV170541835
CXPT01000002
468141
Actinomycetota
GAC
Val
>WENV170541866
CXPT01000020
468141
Actinomycetota
GAC
Val
>WENV170541894
CXPT01000063
468141
Actinomycetota
GAC
Val
>WENV170541896
CXPT01000100
468141
Actinomycetota
GAC
Val
>WENV170541905
CXPT01000154
468141
Actinomycetota
GAC
Val
>WENV170541862
CXPT01000019
323758
Actinomycetota
CGT
Thr
>WENV170541864
CXPT01000019
358727
Actinomycetota
CCG
Arg
>WENV170541840
CXPT01000002
56451
Actinomycetota
CGA
Ser
>WENV170541848
CXPT01000004
99865
Actinomycetota
CAG
Leu
>WENV170541854
CXPT01000013
222475
Actinomycetota
CTT
Lys
>WENV170541861
CXPT01000018
175843
Actinomycetota
CAA
Leu
>WENV170541852
CXPT01000013
430848
Actinomycetota
CTG
Gln
>WENV170541879
CXPT01000025
179238
Actinomycetota
GAT
Ile
>WENV170541841
CXPT01000002
60767
Actinomycetota
TGA
Ser
>WENV170541859
CXPT01000018
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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