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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170541930
CXPU01000035
481233
Actinomycetota
CCC
Gly
>WENV170541949
CXPU01000096
147829
Actinomycetota
TAA
Leu
>WENV170541912
CXPU01000007
280498
Actinomycetota
GTT
Asn
>WENV170541913
CXPU01000007
295964
Actinomycetota
GTT
Asn
>WENV170541925
CXPU01000028
140768
Actinomycetota
TAG
Leu
>WENV170541948
CXPU01000093
176075
Actinomycetota
TCT
Arg
>WENV170541952
CXPU01000108
175848
Actinomycetota
TGG
Pro
>WENV170541939
CXPU01000047
176078
Actinomycetota
GGG
Pro
>WENV170541954
CXPU01000118
482604
Actinomycetota
TTG
Gln
>WENV170541914
CXPU01000011
175837
Actinomycetota
ACG
Arg
>WENV170541915
CXPU01000011
175837
Actinomycetota
ACG
Arg
>WENV170541920
CXPU01000017
29393
Actinomycetota
GCT
Ser
>WENV170541937
CXPU01000047
280549
Actinomycetota
CAC
Val
>WENV170541943
CXPU01000066
280549
Actinomycetota
CAC
Val
>WENV170541951
CXPU01000102
20450
Actinomycetota
GAG
Leu
>WENV170541923
CXPU01000026
280441
Actinomycetota
CCG
Arg
>WENV170541931
CXPU01000037
280702
Actinomycetota
GGC
Ala
>WENV170541932
CXPU01000037
280702
Actinomycetota
GGC
Ala
>WENV170541933
CXPU01000038
176077
Actinomycetota
CAT
Met
>WENV170541940
CXPU01000053
184564
Actinomycetota
CTT
Lys
>WENV170541956
CXPU01000130
280524
Actinomycetota
TGC
Ala
>WENV170541958
CXPU01000150
398948
Actinomycetota
TTC
Glu
>WENV170541918
CXPU01000017
117777
Actinomycetota
>WENV170541919
CXPU01000017
175949
Actinomycetota
CAT
Met
>WENV170541926
CXPU01000029
191955
Actinomycetota
TGT
Thr
>WENV170541916
CXPU01000014
280544
Actinomycetota
GTG
His
>WENV170541911
CXPU01000005
280703
Actinomycetota
CCT
Arg
>WENV170541950
CXPU01000100
280450
Actinomycetota
TTT
Lys
>WENV170541944
CXPU01000067
56451
Actinomycetota
CGA
Ser
>WENV170541929
CXPU01000033
58099
Actinomycetota
TGA
Ser
>WENV170541957
CXPU01000144
99865
Actinomycetota
CAG
Leu
>WENV170541946
CXPU01000080
398853
Actinomycetota
CTG
Gln
>WENV170541953
CXPU01000108
175843
Actinomycetota
CAA
Leu
>WENV170541945
CXPU01000080
289788
Actinomycetota
CTC
Glu
>WENV170541955
CXPU01000130
179238
Actinomycetota
GAT
Ile
>WENV170541924
CXPU01000028
280470
Actinomycetota
CGT
Thr
>WENV170541928
CXPU01000032
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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