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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170541989
CXPV01000053
481233
Actinomycetota
CCC
Gly
>WENV170541975
CXPV01000022
147829
Actinomycetota
TAA
Leu
>WENV170541981
CXPV01000036
280498
Actinomycetota
GTT
Asn
>WENV170541982
CXPV01000036
280498
Actinomycetota
GTT
Asn
>WENV170541977
CXPV01000031
140768
Actinomycetota
TAG
Leu
>WENV170542007
CXPV01000100
176075
Actinomycetota
TCT
Arg
>WENV170541979
CXPV01000032
175848
Actinomycetota
TGG
Pro
>WENV170541974
CXPV01000021
176078
Actinomycetota
GGG
Pro
>WENV170541962
CXPV01000001
59689
Actinomycetota
GGA
Ser
>WENV170541983
CXPV01000037
175837
Actinomycetota
ACG
Arg
>WENV170541984
CXPV01000037
175837
Actinomycetota
ACG
Arg
>WENV170541971
CXPV01000014
29393
Actinomycetota
GCT
Ser
>WENV170541967
CXPV01000010
280549
Actinomycetota
CAC
Val
>WENV170542013
CXPV01000209
280549
Actinomycetota
CAC
Val
>WENV170541960
CXPV01000001
349164
Actinomycetota
CTC
Glu
>WENV170541972
CXPV01000017
20450
Actinomycetota
GAG
Leu
>WENV170541995
CXPV01000066
280702
Actinomycetota
GGC
Ala
>WENV170541996
CXPV01000066
280702
Actinomycetota
GGC
Ala
>WENV170541987
CXPV01000050
176077
Actinomycetota
CAT
Met
>WENV170542004
CXPV01000089
280524
Actinomycetota
TGC
Ala
>WENV170542006
CXPV01000090
398948
Actinomycetota
TTC
Glu
>WENV170541969
CXPV01000014
117777
Actinomycetota
>WENV170541970
CXPV01000014
175949
Actinomycetota
CAT
Met
>WENV170541994
CXPV01000065
227544
Actinomycetota
TAC
Val
>WENV170541985
CXPV01000043
191955
Actinomycetota
TGT
Thr
>WENV170541993
CXPV01000064
280544
Actinomycetota
GTG
His
>WENV170541973
CXPV01000018
280703
Actinomycetota
CCT
Arg
>WENV170542008
CXPV01000116
280450
Actinomycetota
TTT
Lys
>WENV170541966
CXPV01000010
468141
Actinomycetota
GAC
Val
>WENV170542012
CXPV01000209
468141
Actinomycetota
GAC
Val
>WENV170541976
CXPV01000031
323758
Actinomycetota
CGT
Thr
>WENV170541992
CXPV01000061
358727
Actinomycetota
CCG
Arg
>WENV170541990
CXPV01000056
56451
Actinomycetota
CGA
Ser
>WENV170541988
CXPV01000053
99865
Actinomycetota
CAG
Leu
>WENV170541986
CXPV01000049
222475
Actinomycetota
CTT
Lys
>WENV170541980
CXPV01000032
175843
Actinomycetota
CAA
Leu
>WENV170541961
CXPV01000001
430848
Actinomycetota
CTG
Gln
>WENV170542003
CXPV01000089
179238
Actinomycetota
GAT
Ile
>WENV170542002
CXPV01000081
60767
Actinomycetota
TGA
Ser
>WENV170541978
CXPV01000032
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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