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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170542143
CXPX01000114
481233
Actinomycetota
CCC
Gly
>WENV170542129
CXPX01000045
147829
Actinomycetota
TAA
Leu
>WENV170542133
CXPX01000060
280498
Actinomycetota
GTT
Asn
>WENV170542134
CXPX01000060
295964
Actinomycetota
GTT
Asn
>WENV170542128
CXPX01000041
140768
Actinomycetota
TAG
Leu
>WENV170542118
CXPX01000016
176075
Actinomycetota
TCT
Arg
>WENV170542124
CXPX01000034
175848
Actinomycetota
TGG
Pro
>WENV170542106
CXPX01000006
176078
Actinomycetota
GGG
Pro
>WENV170542113
CXPX01000014
482604
Actinomycetota
TTG
Gln
>WENV170542121
CXPX01000022
59689
Actinomycetota
GGA
Ser
>WENV170542116
CXPX01000014
175837
Actinomycetota
ACG
Arg
>WENV170542117
CXPX01000014
175837
Actinomycetota
ACG
Arg
>WENV170542097
CXPX01000001
29393
Actinomycetota
GCT
Ser
>WENV170542100
CXPX01000002
280549
Actinomycetota
CAC
Val
>WENV170542104
CXPX01000006
280549
Actinomycetota
CAC
Val
>WENV170542132
CXPX01000059
20450
Actinomycetota
GAG
Leu
>WENV170542114
CXPX01000014
280702
Actinomycetota
GGC
Ala
>WENV170542115
CXPX01000014
280702
Actinomycetota
GGC
Ala
>WENV170542137
CXPX01000068
176077
Actinomycetota
CAT
Met
>WENV170542120
CXPX01000022
418858
Actinomycetota
CTG
Gln
>WENV170542131
CXPX01000056
280524
Actinomycetota
TGC
Ala
>WENV170542142
CXPX01000096
398948
Actinomycetota
TTC
Glu
>WENV170542095
CXPX01000001
117777
Actinomycetota
>WENV170542096
CXPX01000001
175949
Actinomycetota
CAT
Met
>WENV170542099
CXPX01000002
418252
Actinomycetota
GAC
Val
>WENV170542103
CXPX01000006
418252
Actinomycetota
GAC
Val
>WENV170542138
CXPX01000074
191955
Actinomycetota
TGT
Thr
>WENV170542136
CXPX01000065
280544
Actinomycetota
GTG
His
>WENV170542111
CXPX01000010
280703
Actinomycetota
CCT
Arg
>WENV170542140
CXPX01000081
280450
Actinomycetota
TTT
Lys
>WENV170542127
CXPX01000041
323758
Actinomycetota
CGT
Thr
>WENV170542125
CXPX01000038
56451
Actinomycetota
CGA
Ser
>WENV170542122
CXPX01000032
99865
Actinomycetota
CAG
Leu
>WENV170542123
CXPX01000034
175843
Actinomycetota
CAA
Leu
>WENV170542108
CXPX01000008
317680
Actinomycetota
CCG
Arg
>WENV170542119
CXPX01000022
289788
Actinomycetota
CTC
Glu
>WENV170542130
CXPX01000056
179238
Actinomycetota
GAT
Ile
>WENV170542126
CXPX01000038
60767
Actinomycetota
TGA
Ser
>WENV170542107
CXPX01000007
200276
Actinomycetota
CTT
Lys
>WENV170542139
CXPX01000077
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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