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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170542305
CXQA01000314
147829
Actinomycetota
TAA
Leu
>WENV170542286
CXQA01000172
280498
Actinomycetota
GTT
Asn
>WENV170542300
CXQA01000290
295964
Actinomycetota
GTT
Asn
>WENV170542302
CXQA01000294
140768
Actinomycetota
TAG
Leu
>WENV170542292
CXQA01000227
176075
Actinomycetota
TCT
Arg
>WENV170542277
CXQA01000129
175848
Actinomycetota
TGG
Pro
>WENV170542278
CXQA01000131
176078
Actinomycetota
GGG
Pro
>WENV170542294
CXQA01000234
59689
Actinomycetota
GGA
Ser
>WENV170542289
CXQA01000181
175837
Actinomycetota
ACG
Arg
>WENV170542290
CXQA01000197
175837
Actinomycetota
ACG
Arg
>WENV170542276
CXQA01000121
29393
Actinomycetota
GCT
Ser
>WENV170542264
CXQA01000007
280549
Actinomycetota
CAC
Val
>WENV170542284
CXQA01000155
280549
Actinomycetota
CAC
Val
>WENV170542312
CXQA01000641
349164
Actinomycetota
CTC
Glu
>WENV170542268
CXQA01000019
20450
Actinomycetota
GAG
Leu
>WENV170542287
CXQA01000180
280702
Actinomycetota
GGC
Ala
>WENV170542288
CXQA01000180
280702
Actinomycetota
GGC
Ala
>WENV170542263
CXQA01000007
434162
Actinomycetota
GAC
Val
>WENV170542283
CXQA01000155
434162
Actinomycetota
GAC
Val
>WENV170542298
CXQA01000256
176077
Actinomycetota
CAT
Met
>WENV170542280
CXQA01000149
280524
Actinomycetota
TGC
Ala
>WENV170542296
CXQA01000248
398948
Actinomycetota
TTC
Glu
>WENV170542274
CXQA01000121
117777
Actinomycetota
>WENV170542275
CXQA01000121
175949
Actinomycetota
CAT
Met
>WENV170542271
CXQA01000055
227544
Actinomycetota
TAC
Val
>WENV170542272
CXQA01000082
191955
Actinomycetota
TGT
Thr
>WENV170542303
CXQA01000307
280544
Actinomycetota
GTG
His
>WENV170542273
CXQA01000084
280703
Actinomycetota
CCT
Arg
>WENV170542299
CXQA01000266
280450
Actinomycetota
TTT
Lys
>WENV170542301
CXQA01000294
323758
Actinomycetota
CGT
Thr
>WENV170542295
CXQA01000240
358727
Actinomycetota
CCG
Arg
>WENV170542293
CXQA01000228
56451
Actinomycetota
CGA
Ser
>WENV170542304
CXQA01000313
99865
Actinomycetota
CAG
Leu
>WENV170542291
CXQA01000207
222475
Actinomycetota
CTT
Lys
>WENV170542267
CXQA01000017
175843
Actinomycetota
CAA
Leu
>WENV170542313
CXQA01000641
430848
Actinomycetota
CTG
Gln
>WENV170542279
CXQA01000149
179238
Actinomycetota
GAT
Ile
>WENV170542306
CXQA01000321
60767
Actinomycetota
TGA
Ser
>WENV170542307
CXQA01000380
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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