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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170542361
CXQB01000103
481233
Actinomycetota
CCC
Gly
>WENV170542338
CXQB01000023
147829
Actinomycetota
TAA
Leu
>WENV170542315
CXQB01000002
280498
Actinomycetota
GTT
Asn
>WENV170542316
CXQB01000002
295964
Actinomycetota
GTT
Asn
>WENV170542321
CXQB01000008
140768
Actinomycetota
TAG
Leu
>WENV170542341
CXQB01000041
176075
Actinomycetota
TCT
Arg
>WENV170542337
CXQB01000022
175848
Actinomycetota
TGG
Pro
>WENV170542330
CXQB01000016
176078
Actinomycetota
GGG
Pro
>WENV170542355
CXQB01000079
59689
Actinomycetota
GGA
Ser
>WENV170542334
CXQB01000020
175837
Actinomycetota
ACG
Arg
>WENV170542335
CXQB01000020
175837
Actinomycetota
ACG
Arg
>WENV170542346
CXQB01000053
29393
Actinomycetota
GCT
Ser
>WENV170542328
CXQB01000016
280549
Actinomycetota
CAC
Val
>WENV170542352
CXQB01000075
280549
Actinomycetota
CAC
Val
>WENV170542353
CXQB01000079
349164
Actinomycetota
CTC
Glu
>WENV170542343
CXQB01000051
20450
Actinomycetota
GAG
Leu
>WENV170542332
CXQB01000020
280702
Actinomycetota
GGC
Ala
>WENV170542333
CXQB01000020
280702
Actinomycetota
GGC
Ala
>WENV170542327
CXQB01000016
434162
Actinomycetota
GAC
Val
>WENV170542351
CXQB01000075
434162
Actinomycetota
GAC
Val
>WENV170542358
CXQB01000083
176077
Actinomycetota
CAT
Met
>WENV170542360
CXQB01000095
280524
Actinomycetota
TGC
Ala
>WENV170542356
CXQB01000081
398948
Actinomycetota
TTC
Glu
>WENV170542344
CXQB01000053
117777
Actinomycetota
>WENV170542345
CXQB01000053
175949
Actinomycetota
CAT
Met
>WENV170542324
CXQB01000015
227544
Actinomycetota
TAC
Val
>WENV170542363
CXQB01000119
191955
Actinomycetota
TGT
Thr
>WENV170542317
CXQB01000003
280544
Actinomycetota
GTG
His
>WENV170542340
CXQB01000038
280703
Actinomycetota
CCT
Arg
>WENV170542362
CXQB01000115
280450
Actinomycetota
TTT
Lys
>WENV170542320
CXQB01000008
323758
Actinomycetota
CGT
Thr
>WENV170542322
CXQB01000013
358727
Actinomycetota
CCG
Arg
>WENV170542319
CXQB01000007
56451
Actinomycetota
CGA
Ser
>WENV170542348
CXQB01000059
99865
Actinomycetota
CAG
Leu
>WENV170542339
CXQB01000025
222475
Actinomycetota
CTT
Lys
>WENV170542336
CXQB01000022
175843
Actinomycetota
CAA
Leu
>WENV170542354
CXQB01000079
430848
Actinomycetota
CTG
Gln
>WENV170542359
CXQB01000095
179238
Actinomycetota
GAT
Ile
>WENV170542347
CXQB01000058
60767
Actinomycetota
TGA
Ser
>WENV170542331
CXQB01000020
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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