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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170542679
CXQG01000178
481233
Actinomycetota
CCC
Gly
>WENV170542690
CXQG01000279
147829
Actinomycetota
TAA
Leu
>WENV170542646
CXQG01000014
280498
Actinomycetota
GTT
Asn
>WENV170542647
CXQG01000014
295964
Actinomycetota
GTT
Asn
>WENV170542652
CXQG01000023
140768
Actinomycetota
TAG
Leu
>WENV170542655
CXQG01000056
176075
Actinomycetota
TCT
Arg
>WENV170542645
CXQG01000011
176078
Actinomycetota
GGG
Pro
>WENV170542687
CXQG01000223
482604
Actinomycetota
TTG
Gln
>WENV170542675
CXQG01000158
59689
Actinomycetota
GGA
Ser
>WENV170542664
CXQG01000113
175837
Actinomycetota
ACG
Arg
>WENV170542665
CXQG01000113
175837
Actinomycetota
ACG
Arg
>WENV170542644
CXQG01000007
29393
Actinomycetota
GCT
Ser
>WENV170542650
CXQG01000015
280549
Actinomycetota
CAC
Val
>WENV170542669
CXQG01000136
280549
Actinomycetota
CAC
Val
>WENV170542672
CXQG01000147
20450
Actinomycetota
GAG
Leu
>WENV170542661
CXQG01000088
280702
Actinomycetota
GGC
Ala
>WENV170542662
CXQG01000088
280702
Actinomycetota
GGC
Ala
>WENV170542649
CXQG01000015
434162
Actinomycetota
GAC
Val
>WENV170542668
CXQG01000136
434162
Actinomycetota
GAC
Val
>WENV170542688
CXQG01000259
176077
Actinomycetota
CAT
Met
>WENV170542681
CXQG01000182
280524
Actinomycetota
TGC
Ala
>WENV170542673
CXQG01000152
398948
Actinomycetota
TTC
Glu
>WENV170542642
CXQG01000007
117777
Actinomycetota
>WENV170542643
CXQG01000007
175949
Actinomycetota
CAT
Met
>WENV170542678
CXQG01000170
227544
Actinomycetota
TAC
Val
>WENV170542641
CXQG01000001
280544
Actinomycetota
GTG
His
>WENV170542658
CXQG01000073
280703
Actinomycetota
CCT
Arg
>WENV170542689
CXQG01000264
280450
Actinomycetota
TTT
Lys
>WENV170542651
CXQG01000023
323758
Actinomycetota
CGT
Thr
>WENV170542663
CXQG01000090
56451
Actinomycetota
CGA
Ser
>WENV170542686
CXQG01000208
99865
Actinomycetota
CAG
Leu
>WENV170542656
CXQG01000071
222475
Actinomycetota
CTT
Lys
>WENV170542671
CXQG01000144
175843
Actinomycetota
CAA
Leu
>WENV170542654
CXQG01000052
317680
Actinomycetota
CCG
Arg
>WENV170542677
CXQG01000158
430848
Actinomycetota
CTG
Gln
>WENV170542676
CXQG01000158
289788
Actinomycetota
CTC
Glu
>WENV170542680
CXQG01000182
179238
Actinomycetota
GAT
Ile
>WENV170542653
CXQG01000037
60767
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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