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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170542762
CXQI01000012
481233
Actinomycetota
CCC
Gly
>WENV170542794
CXQI01000102
147829
Actinomycetota
TAA
Leu
>WENV170542760
CXQI01000011
280498
Actinomycetota
GTT
Asn
>WENV170542761
CXQI01000011
280498
Actinomycetota
GTT
Asn
>WENV170542774
CXQI01000046
140768
Actinomycetota
TAG
Leu
>WENV170542783
CXQI01000066
176075
Actinomycetota
TCT
Arg
>WENV170542757
CXQI01000009
175848
Actinomycetota
TGG
Pro
>WENV170542786
CXQI01000071
176078
Actinomycetota
GGG
Pro
>WENV170542793
CXQI01000096
482604
Actinomycetota
TTG
Gln
>WENV170542798
CXQI01000120
59689
Actinomycetota
GGA
Ser
>WENV170542753
CXQI01000001
175837
Actinomycetota
ACG
Arg
>WENV170542754
CXQI01000001
175837
Actinomycetota
ACG
Arg
>WENV170542780
CXQI01000061
29393
Actinomycetota
GCT
Ser
>WENV170542791
CXQI01000087
280549
Actinomycetota
CAC
Val
>WENV170542801
CXQI01000145
280549
Actinomycetota
CAC
Val
>WENV170542765
CXQI01000015
20450
Actinomycetota
GAG
Leu
>WENV170542778
CXQI01000059
280702
Actinomycetota
GGC
Ala
>WENV170542779
CXQI01000059
280702
Actinomycetota
GGC
Ala
>WENV170542790
CXQI01000087
434162
Actinomycetota
GAC
Val
>WENV170542800
CXQI01000145
434162
Actinomycetota
GAC
Val
>WENV170542766
CXQI01000017
176077
Actinomycetota
CAT
Met
>WENV170542785
CXQI01000068
280524
Actinomycetota
TGC
Ala
>WENV170542782
CXQI01000063
398948
Actinomycetota
TTC
Glu
>WENV170542770
CXQI01000039
117777
Actinomycetota
>WENV170542771
CXQI01000039
175949
Actinomycetota
CAT
Met
>WENV170542767
CXQI01000020
227544
Actinomycetota
TAC
Val
>WENV170542769
CXQI01000035
280544
Actinomycetota
GTG
His
>WENV170542777
CXQI01000058
280703
Actinomycetota
CCT
Arg
>WENV170542787
CXQI01000081
280450
Actinomycetota
TTT
Lys
>WENV170542773
CXQI01000046
323758
Actinomycetota
CGT
Thr
>WENV170542772
CXQI01000040
56451
Actinomycetota
CGA
Ser
>WENV170542763
CXQI01000012
99865
Actinomycetota
CAG
Leu
>WENV170542775
CXQI01000051
222475
Actinomycetota
CTT
Lys
>WENV170542758
CXQI01000009
175843
Actinomycetota
CAA
Leu
>WENV170542755
CXQI01000004
317680
Actinomycetota
CCG
Arg
>WENV170542797
CXQI01000120
430848
Actinomycetota
CTG
Gln
>WENV170542796
CXQI01000120
289788
Actinomycetota
CTC
Glu
>WENV170542784
CXQI01000068
179238
Actinomycetota
GAT
Ile
>WENV170542759
CXQI01000010
60767
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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