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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170542949
CXQL01000010
481233
Actinomycetota
CCC
Gly
>WENV170542953
CXQL01000036
147829
Actinomycetota
TAA
Leu
>WENV170542966
CXQL01000110
280498
Actinomycetota
GTT
Asn
>WENV170542992
CXQL01000612
280498
Actinomycetota
GTT
Asn
>WENV170542961
CXQL01000073
295964
Actinomycetota
GTT
Asn
>WENV170542978
CXQL01000338
140768
Actinomycetota
TAG
Leu
>WENV170542988
CXQL01000457
176075
Actinomycetota
TCT
Arg
>WENV170542991
CXQL01000606
175848
Actinomycetota
TGG
Pro
>WENV170542954
CXQL01000043
176078
Actinomycetota
GGG
Pro
>WENV170542975
CXQL01000257
482604
Actinomycetota
TTG
Gln
>WENV170542962
CXQL01000095
59689
Actinomycetota
GGA
Ser
>WENV170542950
CXQL01000018
175837
Actinomycetota
ACG
Arg
>WENV170542951
CXQL01000018
175837
Actinomycetota
ACG
Arg
>WENV170542965
CXQL01000101
29393
Actinomycetota
GCT
Ser
>WENV170542947
CXQL01000009
280549
Actinomycetota
CAC
Val
>WENV170542960
CXQL01000058
280549
Actinomycetota
CAC
Val
>WENV170542955
CXQL01000045
20450
Actinomycetota
GAG
Leu
>WENV170542993
CXQL01000633
280702
Actinomycetota
GGC
Ala
>WENV170542994
CXQL01000633
280702
Actinomycetota
GGC
Ala
>WENV170542990
CXQL01000549
176077
Actinomycetota
CAT
Met
>WENV170542997
CXQL01000692
418858
Actinomycetota
CTG
Gln
>WENV170542945
CXQL01000002
280524
Actinomycetota
TGC
Ala
>WENV170542982
CXQL01000417
398948
Actinomycetota
TTC
Glu
>WENV170542963
CXQL01000101
117777
Actinomycetota
>WENV170542964
CXQL01000101
175949
Actinomycetota
CAT
Met
>WENV170542959
CXQL01000058
418252
Actinomycetota
GAC
Val
>WENV170542969
CXQL01000136
418252
Actinomycetota
GAC
Val
>WENV170542986
CXQL01000425
191955
Actinomycetota
TGT
Thr
>WENV170542989
CXQL01000479
280544
Actinomycetota
GTG
His
>WENV170542970
CXQL01000159
280703
Actinomycetota
CCT
Arg
>WENV170542976
CXQL01000302
280450
Actinomycetota
TTT
Lys
>WENV170542977
CXQL01000338
323758
Actinomycetota
CGT
Thr
>WENV170542952
CXQL01000025
56451
Actinomycetota
CGA
Ser
>WENV170542998
CXQL01001556
280499
Actinomycetota
CCT
Arg
>WENV170542971
CXQL01000162
175843
Actinomycetota
CAA
Leu
>WENV170542995
CXQL01000660
317680
Actinomycetota
CCG
Arg
>WENV170542996
CXQL01000692
289788
Actinomycetota
CTC
Glu
>WENV170542980
CXQL01000404
179238
Actinomycetota
GAT
Ile
>WENV170542972
CXQL01000175
60767
Actinomycetota
TGA
Ser
>WENV170542973
CXQL01000184
200276
Actinomycetota
CTT
Lys
>WENV170542979
CXQL01000347
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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