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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543091
CXQN01000095
176499
Actinomycetota
CAT
Met
>WENV170543076
CXQN01000048
147806
Actinomycetota
TAA
Leu
>WENV170543077
CXQN01000052
280498
Actinomycetota
GTT
Asn
>WENV170543087
CXQN01000084
280498
Actinomycetota
GTT
Asn
>WENV170543088
CXQN01000084
280498
Actinomycetota
GTT
Asn
>WENV170543103
CXQN01001160
280498
Actinomycetota
GTT
Asn
>WENV170543093
CXQN01000097
140768
Actinomycetota
TAG
Leu
>WENV170543062
CXQN01000009
175837
Actinomycetota
ACG
Arg
>WENV170543063
CXQN01000009
175837
Actinomycetota
ACG
Arg
>WENV170543078
CXQN01000054
176638
Actinomycetota
GGG
Pro
>WENV170543052
CXQN01000002
280524
Actinomycetota
TGC
Ala
>WENV170543101
CXQN01000371
398948
Actinomycetota
TTC
Glu
>WENV170543058
CXQN01000008
176723
Actinomycetota
TCT
Arg
>WENV170543053
CXQN01000002
280523
Actinomycetota
GGC
Ala
>WENV170543094
CXQN01000099
280523
Actinomycetota
GGC
Ala
>WENV170543084
CXQN01000060
176555
Actinomycetota
CAT
Met
>WENV170543074
CXQN01000044
280450
Actinomycetota
TTT
Lys
>WENV170543065
CXQN01000015
56166
Actinomycetota
TGA
Ser
>WENV170543085
CXQN01000074
358727
Actinomycetota
CCG
Arg
>WENV170543073
CXQN01000041
175882
Actinomycetota
TGG
Pro
>WENV170543079
CXQN01000054
480319
Actinomycetota
TTG
Gln
>WENV170543070
CXQN01000034
280489
Actinomycetota
CTC
Glu
>WENV170543075
CXQN01000046
280499
Actinomycetota
CCT
Arg
>WENV170543071
CXQN01000034
398853
Actinomycetota
CTG
Gln
>WENV170543072
CXQN01000041
176642
Actinomycetota
CAA
Leu
>WENV170543056
CXQN01000004
237585
Actinomycetota
TAC
Val
>WENV170543100
CXQN01000186
104211
Actinomycetota
CAG
Leu
>WENV170543090
CXQN01000095
117903
Actinomycetota
GTA
Tyr
>WENV170543092
CXQN01000097
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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