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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543268
CXQQ01000076
481233
Actinomycetota
CCC
Gly
>WENV170543262
CXQQ01000042
147829
Actinomycetota
TAA
Leu
>WENV170543258
CXQQ01000037
280498
Actinomycetota
GTT
Asn
>WENV170543259
CXQQ01000037
295964
Actinomycetota
GTT
Asn
>WENV170543271
CXQQ01000082
140768
Actinomycetota
TAG
Leu
>WENV170543273
CXQQ01000127
176075
Actinomycetota
TCT
Arg
>WENV170543250
CXQQ01000027
175848
Actinomycetota
TGG
Pro
>WENV170543263
CXQQ01000044
176078
Actinomycetota
GGG
Pro
>WENV170543274
CXQQ01000156
59689
Actinomycetota
GGA
Ser
>WENV170543243
CXQQ01000015
175837
Actinomycetota
ACG
Arg
>WENV170543244
CXQQ01000015
175837
Actinomycetota
ACG
Arg
>WENV170543254
CXQQ01000031
29393
Actinomycetota
GCT
Ser
>WENV170543241
CXQQ01000010
280549
Actinomycetota
CAC
Val
>WENV170543247
CXQQ01000018
280549
Actinomycetota
CAC
Val
>WENV170543275
CXQQ01000156
349164
Actinomycetota
CTC
Glu
>WENV170543265
CXQQ01000062
20450
Actinomycetota
GAG
Leu
>WENV170543289
CXQQ01000262
280702
Actinomycetota
GGC
Ala
>WENV170543290
CXQQ01000262
280702
Actinomycetota
GGC
Ala
>WENV170543240
CXQQ01000010
434162
Actinomycetota
GAC
Val
>WENV170543246
CXQQ01000018
434162
Actinomycetota
GAC
Val
>WENV170543264
CXQQ01000057
176077
Actinomycetota
CAT
Met
>WENV170543282
CXQQ01000183
280524
Actinomycetota
TGC
Ala
>WENV170543279
CXQQ01000181
398948
Actinomycetota
TTC
Glu
>WENV170543252
CXQQ01000031
117777
Actinomycetota
>WENV170543253
CXQQ01000031
175949
Actinomycetota
CAT
Met
>WENV170543257
CXQQ01000035
227544
Actinomycetota
TAC
Val
>WENV170543269
CXQQ01000079
191955
Actinomycetota
TGT
Thr
>WENV170543267
CXQQ01000073
280544
Actinomycetota
GTG
His
>WENV170543255
CXQQ01000032
280703
Actinomycetota
CCT
Arg
>WENV170543277
CXQQ01000161
280450
Actinomycetota
TTT
Lys
>WENV170543270
CXQQ01000082
323758
Actinomycetota
CGT
Thr
>WENV170543248
CXQQ01000022
358727
Actinomycetota
CCG
Arg
>WENV170543261
CXQQ01000041
56451
Actinomycetota
CGA
Ser
>WENV170543272
CXQQ01000097
99865
Actinomycetota
CAG
Leu
>WENV170543256
CXQQ01000034
222475
Actinomycetota
CTT
Lys
>WENV170543251
CXQQ01000027
175843
Actinomycetota
CAA
Leu
>WENV170543276
CXQQ01000156
430848
Actinomycetota
CTG
Gln
>WENV170543281
CXQQ01000183
179238
Actinomycetota
GAT
Ile
>WENV170543278
CXQQ01000167
60767
Actinomycetota
TGA
Ser
>WENV170543283
CXQQ01000187
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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