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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543315
CXQR01000320
481233
Actinomycetota
CCC
Gly
>WENV170543308
CXQR01000271
147829
Actinomycetota
TAA
Leu
>WENV170543307
CXQR01000189
280498
Actinomycetota
GTT
Asn
>WENV170543299
CXQR01000043
295964
Actinomycetota
GTT
Asn
>WENV170543327
CXQR01000440
140768
Actinomycetota
TAG
Leu
>WENV170543316
CXQR01000323
176075
Actinomycetota
TCT
Arg
>WENV170543296
CXQR01000033
175848
Actinomycetota
TGG
Pro
>WENV170543332
CXQR01000628
59689
Actinomycetota
GGA
Ser
>WENV170543297
CXQR01000038
175837
Actinomycetota
ACG
Arg
>WENV170543298
CXQR01000038
175837
Actinomycetota
ACG
Arg
>WENV170543293
CXQR01000013
29393
Actinomycetota
GCT
Ser
>WENV170543312
CXQR01000283
280549
Actinomycetota
CAC
Val
>WENV170543321
CXQR01000343
280549
Actinomycetota
CAC
Val
>WENV170543333
CXQR01000628
349164
Actinomycetota
CTC
Glu
>WENV170543303
CXQR01000127
20450
Actinomycetota
GAG
Leu
>WENV170543317
CXQR01000329
280702
Actinomycetota
GGC
Ala
>WENV170543318
CXQR01000329
280702
Actinomycetota
GGC
Ala
>WENV170543330
CXQR01000615
176077
Actinomycetota
CAT
Met
>WENV170543301
CXQR01000054
280524
Actinomycetota
TGC
Ala
>WENV170543329
CXQR01000513
398948
Actinomycetota
TTC
Glu
>WENV170543337
CXQR01000798
117777
Actinomycetota
>WENV170543338
CXQR01000798
175949
Actinomycetota
CAT
Met
>WENV170543295
CXQR01000028
227544
Actinomycetota
TAC
Val
>WENV170543328
CXQR01000477
191955
Actinomycetota
TGT
Thr
>WENV170543306
CXQR01000187
280544
Actinomycetota
GTG
His
>WENV170543322
CXQR01000352
280703
Actinomycetota
CCT
Arg
>WENV170543302
CXQR01000086
280450
Actinomycetota
TTT
Lys
>WENV170543311
CXQR01000283
468141
Actinomycetota
GAC
Val
>WENV170543320
CXQR01000343
468141
Actinomycetota
GAC
Val
>WENV170543326
CXQR01000440
323758
Actinomycetota
CGT
Thr
>WENV170543336
CXQR01000695
358727
Actinomycetota
CCG
Arg
>WENV170543324
CXQR01000385
56451
Actinomycetota
CGA
Ser
>WENV170543323
CXQR01000358
222475
Actinomycetota
CTT
Lys
>WENV170543305
CXQR01000185
175843
Actinomycetota
CAA
Leu
>WENV170543334
CXQR01000628
430848
Actinomycetota
CTG
Gln
>WENV170543300
CXQR01000054
179238
Actinomycetota
GAT
Ile
>WENV170543331
CXQR01000625
60767
Actinomycetota
TGA
Ser
>WENV170543325
CXQR01000427
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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