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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543482
CXQU01000111
481233
Actinomycetota
CCC
Gly
>WENV170543492
CXQU01000233
147829
Actinomycetota
TAA
Leu
>WENV170543485
CXQU01000135
280498
Actinomycetota
GTT
Asn
>WENV170543484
CXQU01000133
295964
Actinomycetota
GTT
Asn
>WENV170543501
CXQU01000335
176075
Actinomycetota
TCT
Arg
>WENV170543486
CXQU01000156
175848
Actinomycetota
TGG
Pro
>WENV170543471
CXQU01000010
176078
Actinomycetota
GGG
Pro
>WENV170543507
CXQU01000429
59689
Actinomycetota
GGA
Ser
>WENV170543493
CXQU01000244
175837
Actinomycetota
ACG
Arg
>WENV170543494
CXQU01000244
175837
Actinomycetota
ACG
Arg
>WENV170543480
CXQU01000083
29393
Actinomycetota
GCT
Ser
>WENV170543477
CXQU01000074
280549
Actinomycetota
CAC
Val
>WENV170543512
CXQU01000489
280549
Actinomycetota
CAC
Val
>WENV170543508
CXQU01000429
349164
Actinomycetota
CTC
Glu
>WENV170543469
CXQU01000008
20450
Actinomycetota
GAG
Leu
>WENV170543497
CXQU01000283
280702
Actinomycetota
GGC
Ala
>WENV170543498
CXQU01000283
280702
Actinomycetota
GGC
Ala
>WENV170543503
CXQU01000384
176077
Actinomycetota
CAT
Met
>WENV170543489
CXQU01000157
280524
Actinomycetota
TGC
Ala
>WENV170543496
CXQU01000254
398948
Actinomycetota
TTC
Glu
>WENV170543472
CXQU01000012
117777
Actinomycetota
>WENV170543473
CXQU01000012
175949
Actinomycetota
CAT
Met
>WENV170543502
CXQU01000349
227544
Actinomycetota
TAC
Val
>WENV170543470
CXQU01000009
280544
Actinomycetota
GTG
His
>WENV170543514
CXQU01000511
280703
Actinomycetota
CCT
Arg
>WENV170543510
CXQU01000447
280450
Actinomycetota
TTT
Lys
>WENV170543476
CXQU01000074
468141
Actinomycetota
GAC
Val
>WENV170543511
CXQU01000489
468141
Actinomycetota
GAC
Val
>WENV170543505
CXQU01000407
323758
Actinomycetota
CGT
Thr
>WENV170543491
CXQU01000185
358727
Actinomycetota
CCG
Arg
>WENV170543504
CXQU01000387
56451
Actinomycetota
CGA
Ser
>WENV170543490
CXQU01000166
222475
Actinomycetota
CTT
Lys
>WENV170543487
CXQU01000156
175843
Actinomycetota
CAA
Leu
>WENV170543509
CXQU01000429
430848
Actinomycetota
CTG
Gln
>WENV170543488
CXQU01000157
179238
Actinomycetota
GAT
Ile
>WENV170543483
CXQU01000115
60767
Actinomycetota
TGA
Ser
>WENV170543500
CXQU01000319
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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