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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543565
CXQV01000064
481233
Actinomycetota
CCC
Gly
>WENV170543522
CXQV01000004
147829
Actinomycetota
TAA
Leu
>WENV170543549
CXQV01000027
280498
Actinomycetota
GTT
Asn
>WENV170543550
CXQV01000027
280498
Actinomycetota
GTT
Asn
>WENV170543556
CXQV01000046
280498
Actinomycetota
GTT
Asn
>WENV170543595
CXQV01001238
280498
Actinomycetota
GTT
Asn
>WENV170543600
CXQV01001459
280498
Actinomycetota
GTT
Asn
>WENV170543526
CXQV01000005
140768
Actinomycetota
TAG
Leu
>WENV170543521
CXQV01000003
176075
Actinomycetota
TCT
Arg
>WENV170543524
CXQV01000004
175848
Actinomycetota
TGG
Pro
>WENV170543570
CXQV01000067
176078
Actinomycetota
GGG
Pro
>WENV170543533
CXQV01000009
59689
Actinomycetota
GGA
Ser
>WENV170543571
CXQV01000075
175837
Actinomycetota
ACG
Arg
>WENV170543572
CXQV01000075
175837
Actinomycetota
ACG
Arg
>WENV170543575
CXQV01000076
175837
Actinomycetota
ACG
Arg
>WENV170543576
CXQV01000076
175837
Actinomycetota
ACG
Arg
>WENV170543588
CXQV01001024
175837
Actinomycetota
ACG
Arg
>WENV170543589
CXQV01001024
175837
Actinomycetota
ACG
Arg
>WENV170543538
CXQV01000014
29393
Actinomycetota
GCT
Ser
>WENV170543568
CXQV01000066
280549
Actinomycetota
CAC
Val
>WENV170543578
CXQV01000090
280549
Actinomycetota
CAC
Val
>WENV170543587
CXQV01000994
280549
Actinomycetota
CAC
Val
>WENV170543592
CXQV01001123
280549
Actinomycetota
CAC
Val
>WENV170543563
CXQV01000062
349164
Actinomycetota
CTC
Glu
>WENV170543527
CXQV01000006
20450
Actinomycetota
GAG
Leu
>WENV170543573
CXQV01000076
280702
Actinomycetota
GGC
Ala
>WENV170543574
CXQV01000076
280702
Actinomycetota
GGC
Ala
>WENV170543598
CXQV01001283
280702
Actinomycetota
GGC
Ala
>WENV170543599
CXQV01001415
280702
Actinomycetota
GGC
Ala
>WENV170543567
CXQV01000066
434162
Actinomycetota
GAC
Val
>WENV170543577
CXQV01000090
434162
Actinomycetota
GAC
Val
>WENV170543582
CXQV01000143
434162
Actinomycetota
GAC
Val
>WENV170543586
CXQV01000994
434162
Actinomycetota
GAC
Val
>WENV170543591
CXQV01001123
434162
Actinomycetota
GAC
Val
>WENV170543529
CXQV01000007
176077
Actinomycetota
CAT
Met
>WENV170543558
CXQV01000048
280524
Actinomycetota
TGC
Ala
>WENV170543552
CXQV01000034
398948
Actinomycetota
TTC
Glu
>WENV170543536
CXQV01000014
117777
Actinomycetota
>WENV170543537
CXQV01000014
175949
Actinomycetota
CAT
Met
>WENV170543530
CXQV01000008
227544
Actinomycetota
TAC
Val
>WENV170543551
CXQV01000030
191955
Actinomycetota
TGT
Thr
>WENV170543548
CXQV01000025
280544
Actinomycetota
GTG
His
>WENV170543554
CXQV01000035
280703
Actinomycetota
CCT
Arg
>WENV170543531
CXQV01000009
280450
Actinomycetota
TTT
Lys
>WENV170543525
CXQV01000005
323758
Actinomycetota
CGT
Thr
>WENV170543519
CXQV01000002
358727
Actinomycetota
CCG
Arg
>WENV170543555
CXQV01000044
56451
Actinomycetota
CGA
Ser
>WENV170543583
CXQV01000190
58099
Actinomycetota
TGA
Ser
>WENV170543566
CXQV01000064
99865
Actinomycetota
CAG
Leu
>WENV170543532
CXQV01000009
222475
Actinomycetota
CTT
Lys
>WENV170543523
CXQV01000004
175843
Actinomycetota
CAA
Leu
>WENV170543564
CXQV01000062
430848
Actinomycetota
CTG
Gln
>WENV170543557
CXQV01000048
179238
Actinomycetota
GAT
Ile
>WENV170543561
CXQV01000059
60767
Actinomycetota
TGA
Ser
>WENV170543559
CXQV01000049
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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