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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543703
CXQX01000144
481233
Actinomycetota
CCC
Gly
>WENV170543700
CXQX01000123
147829
Actinomycetota
TAA
Leu
>WENV170543675
CXQX01000031
280498
Actinomycetota
GTT
Asn
>WENV170543676
CXQX01000031
295964
Actinomycetota
GTT
Asn
>WENV170543683
CXQX01000048
140768
Actinomycetota
TAG
Leu
>WENV170543701
CXQX01000124
176075
Actinomycetota
TCT
Arg
>WENV170543673
CXQX01000022
175848
Actinomycetota
TGG
Pro
>WENV170543661
CXQX01000001
176078
Actinomycetota
GGG
Pro
>WENV170543699
CXQX01000120
482604
Actinomycetota
TTG
Gln
>WENV170543686
CXQX01000050
59689
Actinomycetota
GGA
Ser
>WENV170543666
CXQX01000013
175837
Actinomycetota
ACG
Arg
>WENV170543667
CXQX01000013
175837
Actinomycetota
ACG
Arg
>WENV170543681
CXQX01000040
29393
Actinomycetota
GCT
Ser
>WENV170543659
CXQX01000001
280549
Actinomycetota
CAC
Val
>WENV170543694
CXQX01000095
280549
Actinomycetota
CAC
Val
>WENV170543687
CXQX01000052
20450
Actinomycetota
GAG
Leu
>WENV170543664
CXQX01000013
280702
Actinomycetota
GGC
Ala
>WENV170543665
CXQX01000013
280702
Actinomycetota
GGC
Ala
>WENV170543691
CXQX01000083
176077
Actinomycetota
CAT
Met
>WENV170543690
CXQX01000077
280524
Actinomycetota
TGC
Ala
>WENV170543697
CXQX01000102
398948
Actinomycetota
TTC
Glu
>WENV170543679
CXQX01000040
117777
Actinomycetota
>WENV170543680
CXQX01000040
175949
Actinomycetota
CAT
Met
>WENV170543658
CXQX01000001
418252
Actinomycetota
GAC
Val
>WENV170543693
CXQX01000095
418252
Actinomycetota
GAC
Val
>WENV170543702
CXQX01000127
191955
Actinomycetota
TGT
Thr
>WENV170543678
CXQX01000036
280544
Actinomycetota
GTG
His
>WENV170543662
CXQX01000007
280703
Actinomycetota
CCT
Arg
>WENV170543695
CXQX01000097
280450
Actinomycetota
TTT
Lys
>WENV170543682
CXQX01000048
323758
Actinomycetota
CGT
Thr
>WENV170543698
CXQX01000106
56451
Actinomycetota
CGA
Ser
>WENV170543677
CXQX01000034
222475
Actinomycetota
CTT
Lys
>WENV170543672
CXQX01000022
175843
Actinomycetota
CAA
Leu
>WENV170543669
CXQX01000018
317680
Actinomycetota
CCG
Arg
>WENV170543685
CXQX01000050
430848
Actinomycetota
CTG
Gln
>WENV170543684
CXQX01000050
289788
Actinomycetota
CTC
Glu
>WENV170543689
CXQX01000077
179238
Actinomycetota
GAT
Ile
>WENV170543671
CXQX01000020
60767
Actinomycetota
TGA
Ser
>WENV170543663
CXQX01000008
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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