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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543761
CXQY01000059
481233
Actinomycetota
CCC
Gly
>WENV170543714
CXQY01000013
147829
Actinomycetota
TAA
Leu
>WENV170543710
CXQY01000008
280498
Actinomycetota
GTT
Asn
>WENV170543711
CXQY01000008
280498
Actinomycetota
GTT
Asn
>WENV170543754
CXQY01000045
280498
Actinomycetota
GTT
Asn
>WENV170543766
CXQY01000328
280498
Actinomycetota
GTT
Asn
>WENV170543767
CXQY01000328
280498
Actinomycetota
GTT
Asn
>WENV170543728
CXQY01000022
140768
Actinomycetota
TAG
Leu
>WENV170543748
CXQY01000036
176075
Actinomycetota
TCT
Arg
>WENV170543716
CXQY01000013
175848
Actinomycetota
TGG
Pro
>WENV170543737
CXQY01000029
176078
Actinomycetota
GGG
Pro
>WENV170543723
CXQY01000019
482604
Actinomycetota
TTG
Gln
>WENV170543722
CXQY01000019
175837
Actinomycetota
ACG
Arg
>WENV170543731
CXQY01000027
175837
Actinomycetota
ACG
Arg
>WENV170543764
CXQY01000325
175837
Actinomycetota
ACG
Arg
>WENV170543765
CXQY01000325
175837
Actinomycetota
ACG
Arg
>WENV170543757
CXQY01000055
29393
Actinomycetota
GCT
Ser
>WENV170543708
CXQY01000005
280549
Actinomycetota
CAC
Val
>WENV170543735
CXQY01000029
280549
Actinomycetota
CAC
Val
>WENV170543746
CXQY01000031
20450
Actinomycetota
GAG
Leu
>WENV170543730
CXQY01000026
280441
Actinomycetota
CCG
Arg
>WENV170543720
CXQY01000019
280702
Actinomycetota
GGC
Ala
>WENV170543721
CXQY01000019
280702
Actinomycetota
GGC
Ala
>WENV170543768
CXQY01000417
280702
Actinomycetota
GGC
Ala
>WENV170543772
CXQY01000545
280702
Actinomycetota
GGC
Ala
>WENV170543751
CXQY01000038
176077
Actinomycetota
CAT
Met
>WENV170543726
CXQY01000020
184564
Actinomycetota
CTT
Lys
>WENV170543705
CXQY01000004
280524
Actinomycetota
TGC
Ala
>WENV170543752
CXQY01000038
398948
Actinomycetota
TTC
Glu
>WENV170543755
CXQY01000055
117777
Actinomycetota
>WENV170543756
CXQY01000055
175949
Actinomycetota
CAT
Met
>WENV170543753
CXQY01000039
191955
Actinomycetota
TGT
Thr
>WENV170543717
CXQY01000013
280544
Actinomycetota
GTG
His
>WENV170543709
CXQY01000007
280703
Actinomycetota
CCT
Arg
>WENV170543725
CXQY01000020
280450
Actinomycetota
TTT
Lys
>WENV170543719
CXQY01000017
56451
Actinomycetota
CGA
Ser
>WENV170543747
CXQY01000033
58099
Actinomycetota
TGA
Ser
>WENV170543762
CXQY01000059
99865
Actinomycetota
CAG
Leu
>WENV170543759
CXQY01000056
398853
Actinomycetota
CTG
Gln
>WENV170543715
CXQY01000013
175843
Actinomycetota
CAA
Leu
>WENV170543758
CXQY01000056
289788
Actinomycetota
CTC
Glu
>WENV170543704
CXQY01000004
179238
Actinomycetota
GAT
Ile
>WENV170543727
CXQY01000022
280470
Actinomycetota
CGT
Thr
>WENV170543713
CXQY01000013
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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