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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543820
CXQZ01000024
481233
Actinomycetota
CCC
Gly
>WENV170543796
CXQZ01000010
147829
Actinomycetota
TAA
Leu
>WENV170543786
CXQZ01000007
280498
Actinomycetota
GTT
Asn
>WENV170543787
CXQZ01000007
295964
Actinomycetota
GTT
Asn
>WENV170543783
CXQZ01000002
140768
Actinomycetota
TAG
Leu
>WENV170543793
CXQZ01000008
176075
Actinomycetota
TCT
Arg
>WENV170543803
CXQZ01000010
175848
Actinomycetota
TGG
Pro
>WENV170543792
CXQZ01000007
176078
Actinomycetota
GGG
Pro
>WENV170543802
CXQZ01000010
482604
Actinomycetota
TTG
Gln
>WENV170543800
CXQZ01000010
175837
Actinomycetota
ACG
Arg
>WENV170543801
CXQZ01000010
175837
Actinomycetota
ACG
Arg
>WENV170543818
CXQZ01000021
29393
Actinomycetota
GCT
Ser
>WENV170543790
CXQZ01000007
280549
Actinomycetota
CAC
Val
>WENV170543814
CXQZ01000019
280549
Actinomycetota
CAC
Val
>WENV170543804
CXQZ01000012
20450
Actinomycetota
GAG
Leu
>WENV170543780
CXQZ01000002
280441
Actinomycetota
CCG
Arg
>WENV170543798
CXQZ01000010
280702
Actinomycetota
GGC
Ala
>WENV170543799
CXQZ01000010
280702
Actinomycetota
GGC
Ala
>WENV170543822
CXQZ01000026
176077
Actinomycetota
CAT
Met
>WENV170543779
CXQZ01000002
184564
Actinomycetota
CTT
Lys
>WENV170543810
CXQZ01000015
280524
Actinomycetota
TGC
Ala
>WENV170543824
CXQZ01000028
398948
Actinomycetota
TTC
Glu
>WENV170543816
CXQZ01000021
117777
Actinomycetota
>WENV170543817
CXQZ01000021
175949
Actinomycetota
CAT
Met
>WENV170543815
CXQZ01000020
191955
Actinomycetota
TGT
Thr
>WENV170543794
CXQZ01000008
280544
Actinomycetota
GTG
His
>WENV170543807
CXQZ01000014
280703
Actinomycetota
CCT
Arg
>WENV170543778
CXQZ01000002
280450
Actinomycetota
TTT
Lys
>WENV170543805
CXQZ01000014
56451
Actinomycetota
CGA
Ser
>WENV170543806
CXQZ01000014
58099
Actinomycetota
TGA
Ser
>WENV170543819
CXQZ01000024
99865
Actinomycetota
CAG
Leu
>WENV170543777
CXQZ01000002
398853
Actinomycetota
CTG
Gln
>WENV170543797
CXQZ01000010
175843
Actinomycetota
CAA
Leu
>WENV170543776
CXQZ01000002
289788
Actinomycetota
CTC
Glu
>WENV170543809
CXQZ01000015
179238
Actinomycetota
GAT
Ile
>WENV170543782
CXQZ01000002
280470
Actinomycetota
CGT
Thr
>WENV170543795
CXQZ01000010
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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