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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543828
CXRA01000006
481233
Actinomycetota
CCC
Gly
>WENV170543882
CXRA01000109
147829
Actinomycetota
TAA
Leu
>WENV170543865
CXRA01000063
280498
Actinomycetota
GTT
Asn
>WENV170543866
CXRA01000063
280498
Actinomycetota
GTT
Asn
>WENV170543837
CXRA01000012
140768
Actinomycetota
TAG
Leu
>WENV170543834
CXRA01000009
176075
Actinomycetota
TCT
Arg
>WENV170543868
CXRA01000072
175848
Actinomycetota
TGG
Pro
>WENV170543852
CXRA01000026
176078
Actinomycetota
GGG
Pro
>WENV170543858
CXRA01000039
59689
Actinomycetota
GGA
Ser
>WENV170543843
CXRA01000017
175837
Actinomycetota
ACG
Arg
>WENV170543844
CXRA01000017
175837
Actinomycetota
ACG
Arg
>WENV170543873
CXRA01000085
29393
Actinomycetota
GCT
Ser
>WENV170543831
CXRA01000007
280549
Actinomycetota
CAC
Val
>WENV170543850
CXRA01000026
280549
Actinomycetota
CAC
Val
>WENV170543856
CXRA01000039
349164
Actinomycetota
CTC
Glu
>WENV170543835
CXRA01000011
20450
Actinomycetota
GAG
Leu
>WENV170543841
CXRA01000017
280702
Actinomycetota
GGC
Ala
>WENV170543842
CXRA01000017
280702
Actinomycetota
GGC
Ala
>WENV170543860
CXRA01000045
176077
Actinomycetota
CAT
Met
>WENV170543876
CXRA01000091
280524
Actinomycetota
TGC
Ala
>WENV170543872
CXRA01000078
398948
Actinomycetota
TTC
Glu
>WENV170543832
CXRA01000007
117777
Actinomycetota
>WENV170543833
CXRA01000007
175949
Actinomycetota
CAT
Met
>WENV170543854
CXRA01000032
227544
Actinomycetota
TAC
Val
>WENV170543864
CXRA01000061
191955
Actinomycetota
TGT
Thr
>WENV170543845
CXRA01000020
280544
Actinomycetota
GTG
His
>WENV170543855
CXRA01000037
280703
Actinomycetota
CCT
Arg
>WENV170543861
CXRA01000053
280450
Actinomycetota
TTT
Lys
>WENV170543830
CXRA01000007
468141
Actinomycetota
GAC
Val
>WENV170543849
CXRA01000026
468141
Actinomycetota
GAC
Val
>WENV170543836
CXRA01000012
323758
Actinomycetota
CGT
Thr
>WENV170543846
CXRA01000023
358727
Actinomycetota
CCG
Arg
>WENV170543839
CXRA01000014
56451
Actinomycetota
CGA
Ser
>WENV170543874
CXRA01000087
99865
Actinomycetota
CAG
Leu
>WENV170543862
CXRA01000053
222475
Actinomycetota
CTT
Lys
>WENV170543869
CXRA01000072
175843
Actinomycetota
CAA
Leu
>WENV170543857
CXRA01000039
430848
Actinomycetota
CTG
Gln
>WENV170543875
CXRA01000091
179238
Actinomycetota
GAT
Ile
>WENV170543870
CXRA01000077
60767
Actinomycetota
TGA
Ser
>WENV170543838
CXRA01000013
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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