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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543974
CXRC01000007
481233
Actinomycetota
CCC
Gly
>WENV170544002
CXRC01000066
147829
Actinomycetota
TAA
Leu
>WENV170543996
CXRC01000057
280498
Actinomycetota
GTT
Asn
>WENV170543997
CXRC01000057
280498
Actinomycetota
GTT
Asn
>WENV170544010
CXRC01000118
140768
Actinomycetota
TAG
Leu
>WENV170544000
CXRC01000064
176075
Actinomycetota
TCT
Arg
>WENV170544004
CXRC01000084
175848
Actinomycetota
TGG
Pro
>WENV170543970
CXRC01000004
176078
Actinomycetota
GGG
Pro
>WENV170544006
CXRC01000101
59689
Actinomycetota
GGA
Ser
>WENV170543979
CXRC01000010
175837
Actinomycetota
ACG
Arg
>WENV170543980
CXRC01000010
175837
Actinomycetota
ACG
Arg
>WENV170543978
CXRC01000008
29393
Actinomycetota
GCT
Ser
>WENV170543968
CXRC01000004
280549
Actinomycetota
CAC
Val
>WENV170543995
CXRC01000053
280549
Actinomycetota
CAC
Val
>WENV170544007
CXRC01000101
349164
Actinomycetota
CTC
Glu
>WENV170543971
CXRC01000005
20450
Actinomycetota
GAG
Leu
>WENV170543990
CXRC01000045
280702
Actinomycetota
GGC
Ala
>WENV170543991
CXRC01000045
280702
Actinomycetota
GGC
Ala
>WENV170543967
CXRC01000004
434162
Actinomycetota
GAC
Val
>WENV170543994
CXRC01000053
434162
Actinomycetota
GAC
Val
>WENV170543981
CXRC01000017
176077
Actinomycetota
CAT
Met
>WENV170543982
CXRC01000024
280524
Actinomycetota
TGC
Ala
>WENV170543972
CXRC01000006
398948
Actinomycetota
TTC
Glu
>WENV170543976
CXRC01000008
117777
Actinomycetota
>WENV170543977
CXRC01000008
175949
Actinomycetota
CAT
Met
>WENV170543988
CXRC01000042
227544
Actinomycetota
TAC
Val
>WENV170544003
CXRC01000078
191955
Actinomycetota
TGT
Thr
>WENV170543964
CXRC01000001
280544
Actinomycetota
GTG
His
>WENV170543992
CXRC01000047
280703
Actinomycetota
CCT
Arg
>WENV170543998
CXRC01000061
280450
Actinomycetota
TTT
Lys
>WENV170544009
CXRC01000118
323758
Actinomycetota
CGT
Thr
>WENV170543985
CXRC01000036
358727
Actinomycetota
CCG
Arg
>WENV170543987
CXRC01000040
56451
Actinomycetota
CGA
Ser
>WENV170543975
CXRC01000007
99865
Actinomycetota
CAG
Leu
>WENV170543999
CXRC01000061
222475
Actinomycetota
CTT
Lys
>WENV170544005
CXRC01000084
175843
Actinomycetota
CAA
Leu
>WENV170544008
CXRC01000101
430848
Actinomycetota
CTG
Gln
>WENV170544012
CXRC01000172
179238
Actinomycetota
GAT
Ile
>WENV170543983
CXRC01000026
60767
Actinomycetota
TGA
Ser
>WENV170543989
CXRC01000045
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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