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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170544324
CXRI01002406
481233
Actinomycetota
CCC
Gly
>WENV170544300
CXRI01001169
147829
Actinomycetota
TAA
Leu
>WENV170544357
CXRI01003863
280498
Actinomycetota
GTT
Asn
>WENV170544330
CXRI01003106
140768
Actinomycetota
TAG
Leu
>WENV170544323
CXRI01002287
176075
Actinomycetota
TCT
Arg
>WENV170544315
CXRI01001385
482604
Actinomycetota
TTG
Gln
>WENV170544320
CXRI01002026
59689
Actinomycetota
GGA
Ser
>WENV170544326
CXRI01002797
175837
Actinomycetota
ACG
Arg
>WENV170544327
CXRI01002798
175837
Actinomycetota
ACG
Arg
>WENV170544308
CXRI01001300
29393
Actinomycetota
GCT
Ser
>WENV170544312
CXRI01001328
280549
Actinomycetota
CAC
Val
>WENV170544358
CXRI01003908
349164
Actinomycetota
CTC
Glu
>WENV170544322
CXRI01002284
20450
Actinomycetota
GAG
Leu
>WENV170544317
CXRI01001782
280702
Actinomycetota
GGC
Ala
>WENV170544318
CXRI01001947
280702
Actinomycetota
GGC
Ala
>WENV170544311
CXRI01001328
434162
Actinomycetota
GAC
Val
>WENV170544314
CXRI01001328
434162
Actinomycetota
GAC
Val
>WENV170544288
CXRI01000803
398948
Actinomycetota
TTC
Glu
>WENV170544299
CXRI01001101
227544
Actinomycetota
TAC
Val
>WENV170544321
CXRI01002258
280703
Actinomycetota
CCT
Arg
>WENV170544329
CXRI01003106
323758
Actinomycetota
CGT
Thr
>WENV170544325
CXRI01002494
175843
Actinomycetota
CAA
Leu
>WENV170544359
CXRI01003908
430848
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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