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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170544414
CXRJ01000047
481233
Actinomycetota
CCC
Gly
>WENV170544408
CXRJ01000039
147829
Actinomycetota
TAA
Leu
>WENV170544383
CXRJ01000012
280498
Actinomycetota
GTT
Asn
>WENV170544384
CXRJ01000012
280498
Actinomycetota
GTT
Asn
>WENV170544403
CXRJ01000027
140768
Actinomycetota
TAG
Leu
>WENV170544379
CXRJ01000008
176075
Actinomycetota
TCT
Arg
>WENV170544407
CXRJ01000039
175848
Actinomycetota
TGG
Pro
>WENV170544398
CXRJ01000025
176078
Actinomycetota
GGG
Pro
>WENV170544406
CXRJ01000039
482604
Actinomycetota
TTG
Gln
>WENV170544391
CXRJ01000021
175837
Actinomycetota
ACG
Arg
>WENV170544392
CXRJ01000021
175837
Actinomycetota
ACG
Arg
>WENV170544377
CXRJ01000004
29393
Actinomycetota
GCT
Ser
>WENV170544374
CXRJ01000004
280549
Actinomycetota
CAC
Val
>WENV170544396
CXRJ01000025
280549
Actinomycetota
CAC
Val
>WENV170544385
CXRJ01000015
20450
Actinomycetota
GAG
Leu
>WENV170544400
CXRJ01000027
280441
Actinomycetota
CCG
Arg
>WENV170544410
CXRJ01000039
280702
Actinomycetota
GGC
Ala
>WENV170544411
CXRJ01000039
280702
Actinomycetota
GGC
Ala
>WENV170544370
CXRJ01000002
176077
Actinomycetota
CAT
Met
>WENV170544390
CXRJ01000020
184564
Actinomycetota
CTT
Lys
>WENV170544387
CXRJ01000016
280524
Actinomycetota
TGC
Ala
>WENV170544381
CXRJ01000011
398948
Actinomycetota
TTC
Glu
>WENV170544375
CXRJ01000004
117777
Actinomycetota
>WENV170544376
CXRJ01000004
175949
Actinomycetota
CAT
Met
>WENV170544378
CXRJ01000005
191955
Actinomycetota
TGT
Thr
>WENV170544415
CXRJ01000049
280544
Actinomycetota
GTG
His
>WENV170544371
CXRJ01000002
280703
Actinomycetota
CCT
Arg
>WENV170544389
CXRJ01000019
280450
Actinomycetota
TTT
Lys
>WENV170544412
CXRJ01000040
56451
Actinomycetota
CGA
Ser
>WENV170544388
CXRJ01000017
58099
Actinomycetota
TGA
Ser
>WENV170544413
CXRJ01000047
99865
Actinomycetota
CAG
Leu
>WENV170544417
CXRJ01000053
398853
Actinomycetota
CTG
Gln
>WENV170544409
CXRJ01000039
175843
Actinomycetota
CAA
Leu
>WENV170544416
CXRJ01000053
289788
Actinomycetota
CTC
Glu
>WENV170544386
CXRJ01000016
179238
Actinomycetota
GAT
Ile
>WENV170544402
CXRJ01000027
280470
Actinomycetota
CGT
Thr
>WENV170544380
CXRJ01000010
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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