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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170544585
CXRL01000032
481233
Actinomycetota
CCC
Gly
>WENV170544546
CXRL01000009
147829
Actinomycetota
TAA
Leu
>WENV170544583
CXRL01000028
280498
Actinomycetota
GTT
Asn
>WENV170544584
CXRL01000028
295964
Actinomycetota
GTT
Asn
>WENV170544568
CXRL01000017
140768
Actinomycetota
TAG
Leu
>WENV170544539
CXRL01000007
176075
Actinomycetota
TCT
Arg
>WENV170544552
CXRL01000009
175848
Actinomycetota
TGG
Pro
>WENV170544566
CXRL01000013
176078
Actinomycetota
GGG
Pro
>WENV170544558
CXRL01000012
59689
Actinomycetota
GGA
Ser
>WENV170544549
CXRL01000009
175837
Actinomycetota
ACG
Arg
>WENV170544550
CXRL01000009
175837
Actinomycetota
ACG
Arg
>WENV170544576
CXRL01000019
29393
Actinomycetota
GCT
Ser
>WENV170544564
CXRL01000013
280549
Actinomycetota
CAC
Val
>WENV170544573
CXRL01000019
280549
Actinomycetota
CAC
Val
>WENV170544559
CXRL01000012
349164
Actinomycetota
CTC
Glu
>WENV170544581
CXRL01000022
20450
Actinomycetota
GAG
Leu
>WENV170544548
CXRL01000009
280702
Actinomycetota
GGC
Ala
>WENV170544594
CXRL01000066
280702
Actinomycetota
GGC
Ala
>WENV170544542
CXRL01000008
176077
Actinomycetota
CAT
Met
>WENV170544554
CXRL01000010
280524
Actinomycetota
TGC
Ala
>WENV170544544
CXRL01000008
398948
Actinomycetota
TTC
Glu
>WENV170544574
CXRL01000019
117777
Actinomycetota
>WENV170544575
CXRL01000019
175949
Actinomycetota
CAT
Met
>WENV170544545
CXRL01000009
227544
Actinomycetota
TAC
Val
>WENV170544582
CXRL01000026
191955
Actinomycetota
TGT
Thr
>WENV170544538
CXRL01000007
280544
Actinomycetota
GTG
His
>WENV170544543
CXRL01000008
280703
Actinomycetota
CCT
Arg
>WENV170544578
CXRL01000020
280450
Actinomycetota
TTT
Lys
>WENV170544563
CXRL01000013
468141
Actinomycetota
GAC
Val
>WENV170544572
CXRL01000019
468141
Actinomycetota
GAC
Val
>WENV170544567
CXRL01000017
323758
Actinomycetota
CGT
Thr
>WENV170544569
CXRL01000017
358727
Actinomycetota
CCG
Arg
>WENV170544555
CXRL01000011
56451
Actinomycetota
CGA
Ser
>WENV170544586
CXRL01000032
99865
Actinomycetota
CAG
Leu
>WENV170544579
CXRL01000020
222475
Actinomycetota
CTT
Lys
>WENV170544547
CXRL01000009
175843
Actinomycetota
CAA
Leu
>WENV170544560
CXRL01000012
430848
Actinomycetota
CTG
Gln
>WENV170544553
CXRL01000010
179238
Actinomycetota
GAT
Ile
>WENV170544556
CXRL01000011
60767
Actinomycetota
TGA
Ser
>WENV170544551
CXRL01000009
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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