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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170544616
CXRM01000012
481233
Actinomycetota
CCC
Gly
>WENV170544626
CXRM01000014
147829
Actinomycetota
TAA
Leu
>WENV170544611
CXRM01000007
280498
Actinomycetota
GTT
Asn
>WENV170544612
CXRM01000007
295964
Actinomycetota
GTT
Asn
>WENV170544604
CXRM01000004
140768
Actinomycetota
TAG
Leu
>WENV170544636
CXRM01000037
176075
Actinomycetota
TCT
Arg
>WENV170544625
CXRM01000014
175848
Actinomycetota
TGG
Pro
>WENV170544614
CXRM01000007
176078
Actinomycetota
GGG
Pro
>WENV170544624
CXRM01000014
482604
Actinomycetota
TTG
Gln
>WENV170544621
CXRM01000012
59689
Actinomycetota
GGA
Ser
>WENV170544610
CXRM01000006
175837
Actinomycetota
ACG
Arg
>WENV170544655
CXRM01000172
175837
Actinomycetota
ACG
Arg
>WENV170544656
CXRM01000172
175837
Actinomycetota
ACG
Arg
>WENV170544609
CXRM01000006
175837
Actinomycetota
ACG
Arg
>WENV170544600
CXRM01000003
29393
Actinomycetota
GCT
Ser
>WENV170544608
CXRM01000006
280549
Actinomycetota
CAC
Val
>WENV170544643
CXRM01000044
280549
Actinomycetota
CAC
Val
>WENV170544649
CXRM01000099
280549
Actinomycetota
CAC
Val
>WENV170544653
CXRM01000153
280549
Actinomycetota
CAC
Val
>WENV170544638
CXRM01000039
20450
Actinomycetota
GAG
Leu
>WENV170544628
CXRM01000015
280702
Actinomycetota
GGC
Ala
>WENV170544629
CXRM01000015
280702
Actinomycetota
GGC
Ala
>WENV170544633
CXRM01000027
176077
Actinomycetota
CAT
Met
>WENV170544596
CXRM01000001
280524
Actinomycetota
TGC
Ala
>WENV170544639
CXRM01000040
280524
Actinomycetota
TGC
Ala
>WENV170544658
CXRM01000176
280524
Actinomycetota
TGC
Ala
>WENV170544647
CXRM01000057
398948
Actinomycetota
TTC
Glu
>WENV170544598
CXRM01000003
117777
Actinomycetota
>WENV170544599
CXRM01000003
175949
Actinomycetota
CAT
Met
>WENV170544642
CXRM01000044
418252
Actinomycetota
GAC
Val
>WENV170544648
CXRM01000099
418252
Actinomycetota
GAC
Val
>WENV170544652
CXRM01000153
418252
Actinomycetota
GAC
Val
>WENV170544615
CXRM01000011
191955
Actinomycetota
TGT
Thr
>WENV170544607
CXRM01000005
280544
Actinomycetota
GTG
His
>WENV170544634
CXRM01000027
280703
Actinomycetota
CCT
Arg
>WENV170544619
CXRM01000012
280450
Actinomycetota
TTT
Lys
>WENV170544603
CXRM01000004
323758
Actinomycetota
CGT
Thr
>WENV170544601
CXRM01000003
56451
Actinomycetota
CGA
Ser
>WENV170544637
CXRM01000038
99865
Actinomycetota
CAG
Leu
>WENV170544620
CXRM01000012
222475
Actinomycetota
CTT
Lys
>WENV170544627
CXRM01000014
175843
Actinomycetota
CAA
Leu
>WENV170544623
CXRM01000013
317680
Actinomycetota
CCG
Arg
>WENV170544618
CXRM01000012
430848
Actinomycetota
CTG
Gln
>WENV170544617
CXRM01000012
289788
Actinomycetota
CTC
Glu
>WENV170544595
CXRM01000001
179238
Actinomycetota
GAT
Ile
>WENV170544602
CXRM01000003
60767
Actinomycetota
TGA
Ser
>WENV170544645
CXRM01000054
60767
Actinomycetota
TGA
Ser
>WENV170544606
CXRM01000005
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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