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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170544702
CXRN01000040
481233
Actinomycetota
CCC
Gly
>WENV170544664
CXRN01000007
147829
Actinomycetota
TAA
Leu
>WENV170544686
CXRN01000022
280498
Actinomycetota
GTT
Asn
>WENV170544687
CXRN01000022
295964
Actinomycetota
GTT
Asn
>WENV170544704
CXRN01000047
140768
Actinomycetota
TAG
Leu
>WENV170544690
CXRN01000025
176075
Actinomycetota
TCT
Arg
>WENV170544663
CXRN01000007
175848
Actinomycetota
TGG
Pro
>WENV170544696
CXRN01000027
176078
Actinomycetota
GGG
Pro
>WENV170544662
CXRN01000007
482604
Actinomycetota
TTG
Gln
>WENV170544697
CXRN01000028
59689
Actinomycetota
GGA
Ser
>WENV170544677
CXRN01000015
175837
Actinomycetota
ACG
Arg
>WENV170544678
CXRN01000015
175837
Actinomycetota
ACG
Arg
>WENV170544674
CXRN01000011
29393
Actinomycetota
GCT
Ser
>WENV170544671
CXRN01000011
280549
Actinomycetota
CAC
Val
>WENV170544694
CXRN01000027
280549
Actinomycetota
CAC
Val
>WENV170544700
CXRN01000031
20450
Actinomycetota
GAG
Leu
>WENV170544666
CXRN01000007
280702
Actinomycetota
GGC
Ala
>WENV170544667
CXRN01000007
280702
Actinomycetota
GGC
Ala
>WENV170544670
CXRN01000011
434162
Actinomycetota
GAC
Val
>WENV170544693
CXRN01000027
434162
Actinomycetota
GAC
Val
>WENV170544675
CXRN01000013
176077
Actinomycetota
CAT
Met
>WENV170544707
CXRN01000060
280524
Actinomycetota
TGC
Ala
>WENV170544708
CXRN01000070
398948
Actinomycetota
TTC
Glu
>WENV170544672
CXRN01000011
117777
Actinomycetota
>WENV170544673
CXRN01000011
175949
Actinomycetota
CAT
Met
>WENV170544661
CXRN01000004
227544
Actinomycetota
TAC
Val
>WENV170544680
CXRN01000018
191955
Actinomycetota
TGT
Thr
>WENV170544668
CXRN01000008
280544
Actinomycetota
GTG
His
>WENV170544676
CXRN01000013
280703
Actinomycetota
CCT
Arg
>WENV170544681
CXRN01000019
280450
Actinomycetota
TTT
Lys
>WENV170544703
CXRN01000047
323758
Actinomycetota
CGT
Thr
>WENV170544688
CXRN01000023
56451
Actinomycetota
CGA
Ser
>WENV170544701
CXRN01000040
99865
Actinomycetota
CAG
Leu
>WENV170544682
CXRN01000019
222475
Actinomycetota
CTT
Lys
>WENV170544665
CXRN01000007
175843
Actinomycetota
CAA
Leu
>WENV170544683
CXRN01000019
317680
Actinomycetota
CCG
Arg
>WENV170544699
CXRN01000028
430848
Actinomycetota
CTG
Gln
>WENV170544698
CXRN01000028
289788
Actinomycetota
CTC
Glu
>WENV170544706
CXRN01000060
179238
Actinomycetota
GAT
Ile
>WENV170544689
CXRN01000023
60767
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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