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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170544750
CXRO01000529
481233
Actinomycetota
CCC
Gly
>WENV170544745
CXRO01000350
147829
Actinomycetota
TAA
Leu
>WENV170544740
CXRO01000319
280498
Actinomycetota
GTT
Asn
>WENV170544749
CXRO01000526
295964
Actinomycetota
GTT
Asn
>WENV170544744
CXRO01000349
140768
Actinomycetota
TAG
Leu
>WENV170544735
CXRO01000297
176075
Actinomycetota
TCT
Arg
>WENV170544741
CXRO01000346
175848
Actinomycetota
TGG
Pro
>WENV170544713
CXRO01000045
176078
Actinomycetota
GGG
Pro
>WENV170544739
CXRO01000309
482604
Actinomycetota
TTG
Gln
>WENV170544731
CXRO01000171
59689
Actinomycetota
GGA
Ser
>WENV170544720
CXRO01000127
175837
Actinomycetota
ACG
Arg
>WENV170544721
CXRO01000127
175837
Actinomycetota
ACG
Arg
>WENV170544724
CXRO01000135
29393
Actinomycetota
GCT
Ser
>WENV170544738
CXRO01000303
280549
Actinomycetota
CAC
Val
>WENV170544754
CXRO01000534
280549
Actinomycetota
CAC
Val
>WENV170544728
CXRO01000169
20450
Actinomycetota
GAG
Leu
>WENV170544742
CXRO01000347
280702
Actinomycetota
GGC
Ala
>WENV170544746
CXRO01000437
280702
Actinomycetota
GGC
Ala
>WENV170544723
CXRO01000133
280524
Actinomycetota
TGC
Ala
>WENV170544717
CXRO01000092
398948
Actinomycetota
TTC
Glu
>WENV170544718
CXRO01000105
117777
Actinomycetota
>WENV170544719
CXRO01000105
175949
Actinomycetota
CAT
Met
>WENV170544753
CXRO01000534
418252
Actinomycetota
GAC
Val
>WENV170544737
CXRO01000303
418252
Actinomycetota
GAC
Val
>WENV170544712
CXRO01000035
191955
Actinomycetota
TGT
Thr
>WENV170544726
CXRO01000147
280544
Actinomycetota
GTG
His
>WENV170544725
CXRO01000140
280703
Actinomycetota
CCT
Arg
>WENV170544734
CXRO01000247
280450
Actinomycetota
TTT
Lys
>WENV170544743
CXRO01000349
323758
Actinomycetota
CGT
Thr
>WENV170544711
CXRO01000017
56451
Actinomycetota
CGA
Ser
>WENV170544714
CXRO01000047
222475
Actinomycetota
CTT
Lys
>WENV170544747
CXRO01000463
175843
Actinomycetota
CAA
Leu
>WENV170544756
CXRO01000572
317680
Actinomycetota
CCG
Arg
>WENV170544730
CXRO01000171
430848
Actinomycetota
CTG
Gln
>WENV170544729
CXRO01000171
289788
Actinomycetota
CTC
Glu
>WENV170544722
CXRO01000133
179238
Actinomycetota
GAT
Ile
>WENV170544732
CXRO01000200
60767
Actinomycetota
TGA
Ser
>WENV170544748
CXRO01000480
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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