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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170544862
CXRQ01000004
481233
Actinomycetota
CCC
Gly
>WENV170544886
CXRQ01000023
147829
Actinomycetota
TAA
Leu
>WENV170544855
CXRQ01000001
280498
Actinomycetota
GTT
Asn
>WENV170544856
CXRQ01000001
295964
Actinomycetota
GTT
Asn
>WENV170544899
CXRQ01000033
140768
Actinomycetota
TAG
Leu
>WENV170544897
CXRQ01000027
176075
Actinomycetota
TCT
Arg
>WENV170544893
CXRQ01000023
175848
Actinomycetota
TGG
Pro
>WENV170544876
CXRQ01000007
176078
Actinomycetota
GGG
Pro
>WENV170544892
CXRQ01000023
482604
Actinomycetota
TTG
Gln
>WENV170544861
CXRQ01000002
59689
Actinomycetota
GGA
Ser
>WENV170544889
CXRQ01000023
175837
Actinomycetota
ACG
Arg
>WENV170544890
CXRQ01000023
175837
Actinomycetota
ACG
Arg
>WENV170544869
CXRQ01000005
29393
Actinomycetota
GCT
Ser
>WENV170544866
CXRQ01000005
280549
Actinomycetota
CAC
Val
>WENV170544874
CXRQ01000007
280549
Actinomycetota
CAC
Val
>WENV170544857
CXRQ01000002
349164
Actinomycetota
CTC
Glu
>WENV170544891
CXRQ01000023
20450
Actinomycetota
GAG
Leu
>WENV170544888
CXRQ01000023
280702
Actinomycetota
GGC
Ala
>WENV170544911
CXRQ01000077
280702
Actinomycetota
GGC
Ala
>WENV170544865
CXRQ01000005
434162
Actinomycetota
GAC
Val
>WENV170544873
CXRQ01000007
434162
Actinomycetota
GAC
Val
>WENV170544879
CXRQ01000013
176077
Actinomycetota
CAT
Met
>WENV170544901
CXRQ01000038
280524
Actinomycetota
TGC
Ala
>WENV170544885
CXRQ01000020
398948
Actinomycetota
TTC
Glu
>WENV170544867
CXRQ01000005
117777
Actinomycetota
>WENV170544868
CXRQ01000005
175949
Actinomycetota
CAT
Met
>WENV170544877
CXRQ01000008
227544
Actinomycetota
TAC
Val
>WENV170544902
CXRQ01000040
191955
Actinomycetota
TGT
Thr
>WENV170544896
CXRQ01000027
280544
Actinomycetota
GTG
His
>WENV170544883
CXRQ01000019
280703
Actinomycetota
CCT
Arg
>WENV170544859
CXRQ01000002
280450
Actinomycetota
TTT
Lys
>WENV170544898
CXRQ01000033
323758
Actinomycetota
CGT
Thr
>WENV170544895
CXRQ01000025
358727
Actinomycetota
CCG
Arg
>WENV170544870
CXRQ01000005
56451
Actinomycetota
CGA
Ser
>WENV170544863
CXRQ01000004
99865
Actinomycetota
CAG
Leu
>WENV170544860
CXRQ01000002
222475
Actinomycetota
CTT
Lys
>WENV170544887
CXRQ01000023
175843
Actinomycetota
CAA
Leu
>WENV170544858
CXRQ01000002
430848
Actinomycetota
CTG
Gln
>WENV170544900
CXRQ01000038
179238
Actinomycetota
GAT
Ile
>WENV170544881
CXRQ01000015
60767
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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