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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170545049
CXRT01000009
481233
Actinomycetota
CCC
Gly
>WENV170545029
CXRT01000003
147829
Actinomycetota
TAA
Leu
>WENV170545056
CXRT01000016
280498
Actinomycetota
GTT
Asn
>WENV170545057
CXRT01000016
295964
Actinomycetota
GTT
Asn
>WENV170545060
CXRT01000026
140768
Actinomycetota
TAG
Leu
>WENV170545058
CXRT01000023
176075
Actinomycetota
TCT
Arg
>WENV170545028
CXRT01000003
175848
Actinomycetota
TGG
Pro
>WENV170545040
CXRT01000004
176078
Actinomycetota
GGG
Pro
>WENV170545053
CXRT01000012
59689
Actinomycetota
GGA
Ser
>WENV170545034
CXRT01000003
175837
Actinomycetota
ACG
Arg
>WENV170545033
CXRT01000003
175837
Actinomycetota
ACG
Arg
>WENV170545048
CXRT01000008
29393
Actinomycetota
GCT
Ser
>WENV170545038
CXRT01000004
280549
Actinomycetota
CAC
Val
>WENV170545045
CXRT01000008
280549
Actinomycetota
CAC
Val
>WENV170545054
CXRT01000012
349164
Actinomycetota
CTC
Glu
>WENV170545026
CXRT01000003
20450
Actinomycetota
GAG
Leu
>WENV170545031
CXRT01000003
280702
Actinomycetota
GGC
Ala
>WENV170545032
CXRT01000003
280702
Actinomycetota
GGC
Ala
>WENV170545023
CXRT01000001
176077
Actinomycetota
CAT
Met
>WENV170545068
CXRT01000061
280524
Actinomycetota
TGC
Ala
>WENV170545070
CXRT01000065
398948
Actinomycetota
TTC
Glu
>WENV170545046
CXRT01000008
117777
Actinomycetota
>WENV170545047
CXRT01000008
175949
Actinomycetota
CAT
Met
>WENV170545066
CXRT01000050
227544
Actinomycetota
TAC
Val
>WENV170545025
CXRT01000002
191955
Actinomycetota
TGT
Thr
>WENV170545041
CXRT01000005
280544
Actinomycetota
GTG
His
>WENV170545024
CXRT01000001
280703
Actinomycetota
CCT
Arg
>WENV170545051
CXRT01000011
280450
Actinomycetota
TTT
Lys
>WENV170545037
CXRT01000004
468141
Actinomycetota
GAC
Val
>WENV170545044
CXRT01000008
468141
Actinomycetota
GAC
Val
>WENV170545059
CXRT01000026
323758
Actinomycetota
CGT
Thr
>WENV170545077
CXRT01000089
358727
Actinomycetota
CCG
Arg
>WENV170545062
CXRT01000031
56451
Actinomycetota
CGA
Ser
>WENV170545050
CXRT01000009
99865
Actinomycetota
CAG
Leu
>WENV170545052
CXRT01000011
222475
Actinomycetota
CTT
Lys
>WENV170545030
CXRT01000003
175843
Actinomycetota
CAA
Leu
>WENV170545055
CXRT01000012
430848
Actinomycetota
CTG
Gln
>WENV170545067
CXRT01000061
179238
Actinomycetota
GAT
Ile
>WENV170545063
CXRT01000031
60767
Actinomycetota
TGA
Ser
>WENV170545027
CXRT01000003
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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