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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170545354
CXRZ01000015
481233
Actinomycetota
CCC
Gly
>WENV170545376
CXRZ01000027
147829
Actinomycetota
TAA
Leu
>WENV170545346
CXRZ01000007
280498
Actinomycetota
GTT
Asn
>WENV170545347
CXRZ01000007
295964
Actinomycetota
GTT
Asn
>WENV170545337
CXRZ01000002
140768
Actinomycetota
TAG
Leu
>WENV170545331
CXRZ01000001
176075
Actinomycetota
TCT
Arg
>WENV170545341
CXRZ01000004
175848
Actinomycetota
TGG
Pro
>WENV170545360
CXRZ01000018
176078
Actinomycetota
GGG
Pro
>WENV170545367
CXRZ01000020
59689
Actinomycetota
GGA
Ser
>WENV170545344
CXRZ01000004
175837
Actinomycetota
ACG
Arg
>WENV170545381
CXRZ01000060
175837
Actinomycetota
ACG
Arg
>WENV170545382
CXRZ01000060
175837
Actinomycetota
ACG
Arg
>WENV170545383
CXRZ01000096
175837
Actinomycetota
ACG
Arg
>WENV170545384
CXRZ01000096
175837
Actinomycetota
ACG
Arg
>WENV170545366
CXRZ01000019
29393
Actinomycetota
GCT
Ser
>WENV170545358
CXRZ01000018
280549
Actinomycetota
CAC
Val
>WENV170545363
CXRZ01000019
280549
Actinomycetota
CAC
Val
>WENV170545368
CXRZ01000020
349164
Actinomycetota
CTC
Glu
>WENV170545339
CXRZ01000004
20450
Actinomycetota
GAG
Leu
>WENV170545343
CXRZ01000004
280702
Actinomycetota
GGC
Ala
>WENV170545379
CXRZ01000055
280702
Actinomycetota
GGC
Ala
>WENV170545380
CXRZ01000055
280702
Actinomycetota
GGC
Ala
>WENV170545350
CXRZ01000012
176077
Actinomycetota
CAT
Met
>WENV170545378
CXRZ01000029
280524
Actinomycetota
TGC
Ala
>WENV170545352
CXRZ01000012
398948
Actinomycetota
TTC
Glu
>WENV170545364
CXRZ01000019
117777
Actinomycetota
>WENV170545365
CXRZ01000019
175949
Actinomycetota
CAT
Met
>WENV170545345
CXRZ01000006
227544
Actinomycetota
TAC
Val
>WENV170545375
CXRZ01000024
191955
Actinomycetota
TGT
Thr
>WENV170545332
CXRZ01000001
280544
Actinomycetota
GTG
His
>WENV170545351
CXRZ01000012
280703
Actinomycetota
CCT
Arg
>WENV170545370
CXRZ01000020
280450
Actinomycetota
TTT
Lys
>WENV170545357
CXRZ01000018
468141
Actinomycetota
GAC
Val
>WENV170545362
CXRZ01000019
468141
Actinomycetota
GAC
Val
>WENV170545336
CXRZ01000002
323758
Actinomycetota
CGT
Thr
>WENV170545334
CXRZ01000002
358727
Actinomycetota
CCG
Arg
>WENV170545371
CXRZ01000021
56451
Actinomycetota
CGA
Ser
>WENV170545353
CXRZ01000015
99865
Actinomycetota
CAG
Leu
>WENV170545333
CXRZ01000002
222475
Actinomycetota
CTT
Lys
>WENV170545342
CXRZ01000004
175843
Actinomycetota
CAA
Leu
>WENV170545369
CXRZ01000020
430848
Actinomycetota
CTG
Gln
>WENV170545377
CXRZ01000029
179238
Actinomycetota
GAT
Ile
>WENV170545372
CXRZ01000021
60767
Actinomycetota
TGA
Ser
>WENV170545340
CXRZ01000004
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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