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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170545480
CXSC01000066
481233
Actinomycetota
CCC
Gly
>WENV170545464
CXSC01000029
147829
Actinomycetota
TAA
Leu
>WENV170545444
CXSC01000007
280498
Actinomycetota
GTT
Asn
>WENV170545445
CXSC01000007
295964
Actinomycetota
GTT
Asn
>WENV170545461
CXSC01000020
140768
Actinomycetota
TAG
Leu
>WENV170545469
CXSC01000037
176075
Actinomycetota
TCT
Arg
>WENV170545467
CXSC01000030
175848
Actinomycetota
TGG
Pro
>WENV170545478
CXSC01000064
176078
Actinomycetota
GGG
Pro
>WENV170545466
CXSC01000030
482604
Actinomycetota
TTG
Gln
>WENV170545481
CXSC01000071
59689
Actinomycetota
GGA
Ser
>WENV170545459
CXSC01000018
175837
Actinomycetota
ACG
Arg
>WENV170545503
CXSC01000424
175837
Actinomycetota
ACG
Arg
>WENV170545504
CXSC01000424
175837
Actinomycetota
ACG
Arg
>WENV170545442
CXSC01000002
29393
Actinomycetota
GCT
Ser
>WENV170545452
CXSC01000014
280549
Actinomycetota
CAC
Val
>WENV170545457
CXSC01000016
280549
Actinomycetota
CAC
Val
>WENV170545475
CXSC01000050
20450
Actinomycetota
GAG
Leu
>WENV170545458
CXSC01000018
280702
Actinomycetota
GGC
Ala
>WENV170545447
CXSC01000013
176077
Actinomycetota
CAT
Met
>WENV170545483
CXSC01000071
418858
Actinomycetota
CTG
Gln
>WENV170545477
CXSC01000063
280524
Actinomycetota
TGC
Ala
>WENV170545486
CXSC01000093
398948
Actinomycetota
TTC
Glu
>WENV170545440
CXSC01000002
117777
Actinomycetota
>WENV170545441
CXSC01000002
175949
Actinomycetota
CAT
Met
>WENV170545451
CXSC01000014
418252
Actinomycetota
GAC
Val
>WENV170545456
CXSC01000016
418252
Actinomycetota
GAC
Val
>WENV170545443
CXSC01000006
191955
Actinomycetota
TGT
Thr
>WENV170545454
CXSC01000015
280544
Actinomycetota
GTG
His
>WENV170545448
CXSC01000013
280703
Actinomycetota
CCT
Arg
>WENV170545473
CXSC01000049
280450
Actinomycetota
TTT
Lys
>WENV170545460
CXSC01000020
323758
Actinomycetota
CGT
Thr
>WENV170545470
CXSC01000039
56451
Actinomycetota
CGA
Ser
>WENV170545479
CXSC01000066
99865
Actinomycetota
CAG
Leu
>WENV170545465
CXSC01000030
175843
Actinomycetota
CAA
Leu
>WENV170545462
CXSC01000023
317680
Actinomycetota
CCG
Arg
>WENV170545482
CXSC01000071
289788
Actinomycetota
CTC
Glu
>WENV170545476
CXSC01000063
179238
Actinomycetota
GAT
Ile
>WENV170545471
CXSC01000039
60767
Actinomycetota
TGA
Ser
>WENV170545474
CXSC01000049
200276
Actinomycetota
CTT
Lys
>WENV170545468
CXSC01000033
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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