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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170545674
CXSF01000026
147829
Actinomycetota
TAA
Leu
>WENV170545664
CXSF01000004
280498
Actinomycetota
GTT
Asn
>WENV170545665
CXSF01000004
295964
Actinomycetota
GTT
Asn
>WENV170545682
CXSF01000036
140768
Actinomycetota
TAG
Leu
>WENV170545695
CXSF01000063
176075
Actinomycetota
TCT
Arg
>WENV170545677
CXSF01000027
175848
Actinomycetota
TGG
Pro
>WENV170545663
CXSF01000002
176078
Actinomycetota
GGG
Pro
>WENV170545676
CXSF01000027
482604
Actinomycetota
TTG
Gln
>WENV170545678
CXSF01000032
59689
Actinomycetota
GGA
Ser
>WENV170545700
CXSF01000081
175837
Actinomycetota
ACG
Arg
>WENV170545701
CXSF01000081
175837
Actinomycetota
ACG
Arg
>WENV170545669
CXSF01000012
29393
Actinomycetota
GCT
Ser
>WENV170545661
CXSF01000002
280549
Actinomycetota
CAC
Val
>WENV170545672
CXSF01000013
280549
Actinomycetota
CAC
Val
>WENV170545697
CXSF01000069
20450
Actinomycetota
GAG
Leu
>WENV170545702
CXSF01000089
280702
Actinomycetota
GGC
Ala
>WENV170545703
CXSF01000089
280702
Actinomycetota
GGC
Ala
>WENV170545660
CXSF01000002
434162
Actinomycetota
GAC
Val
>WENV170545671
CXSF01000013
434162
Actinomycetota
GAC
Val
>WENV170545693
CXSF01000059
176077
Actinomycetota
CAT
Met
>WENV170545699
CXSF01000075
280524
Actinomycetota
TGC
Ala
>WENV170545690
CXSF01000059
398948
Actinomycetota
TTC
Glu
>WENV170545667
CXSF01000012
117777
Actinomycetota
>WENV170545668
CXSF01000012
175949
Actinomycetota
CAT
Met
>WENV170545687
CXSF01000043
227544
Actinomycetota
TAC
Val
>WENV170545666
CXSF01000006
191955
Actinomycetota
TGT
Thr
>WENV170545688
CXSF01000045
280544
Actinomycetota
GTG
His
>WENV170545705
CXSF01000095
280703
Actinomycetota
CCT
Arg
>WENV170545704
CXSF01000092
280450
Actinomycetota
TTT
Lys
>WENV170545681
CXSF01000036
323758
Actinomycetota
CGT
Thr
>WENV170545694
CXSF01000060
56451
Actinomycetota
CGA
Ser
>WENV170545706
CXSF01000111
99865
Actinomycetota
CAG
Leu
>WENV170545686
CXSF01000041
222475
Actinomycetota
CTT
Lys
>WENV170545675
CXSF01000027
175843
Actinomycetota
CAA
Leu
>WENV170545683
CXSF01000038
317680
Actinomycetota
CCG
Arg
>WENV170545680
CXSF01000032
430848
Actinomycetota
CTG
Gln
>WENV170545679
CXSF01000032
289788
Actinomycetota
CTC
Glu
>WENV170545698
CXSF01000075
179238
Actinomycetota
GAT
Ile
>WENV170545689
CXSF01000046
60767
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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