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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170545772
CXSG01000026
481233
Actinomycetota
CCC
Gly
>WENV170545736
CXSG01000010
147829
Actinomycetota
TAA
Leu
>WENV170545755
CXSG01000019
280498
Actinomycetota
GTT
Asn
>WENV170545756
CXSG01000019
295964
Actinomycetota
GTT
Asn
>WENV170545770
CXSG01000025
140768
Actinomycetota
TAG
Leu
>WENV170545747
CXSG01000018
176075
Actinomycetota
TCT
Arg
>WENV170545746
CXSG01000016
175848
Actinomycetota
TGG
Pro
>WENV170545754
CXSG01000019
176078
Actinomycetota
GGG
Pro
>WENV170545745
CXSG01000016
482604
Actinomycetota
TTG
Gln
>WENV170545727
CXSG01000002
59689
Actinomycetota
GGA
Ser
>WENV170545743
CXSG01000016
175837
Actinomycetota
ACG
Arg
>WENV170545744
CXSG01000016
175837
Actinomycetota
ACG
Arg
>WENV170545767
CXSG01000022
29393
Actinomycetota
GCT
Ser
>WENV170545752
CXSG01000019
280549
Actinomycetota
CAC
Val
>WENV170545764
CXSG01000022
280549
Actinomycetota
CAC
Val
>WENV170545728
CXSG01000002
349164
Actinomycetota
CTC
Glu
>WENV170545740
CXSG01000013
20450
Actinomycetota
GAG
Leu
>WENV170545741
CXSG01000016
280702
Actinomycetota
GGC
Ala
>WENV170545742
CXSG01000016
280702
Actinomycetota
GGC
Ala
>WENV170545751
CXSG01000019
434162
Actinomycetota
GAC
Val
>WENV170545763
CXSG01000022
434162
Actinomycetota
GAC
Val
>WENV170545760
CXSG01000020
176077
Actinomycetota
CAT
Met
>WENV170545739
CXSG01000012
280524
Actinomycetota
TGC
Ala
>WENV170545757
CXSG01000020
398948
Actinomycetota
TTC
Glu
>WENV170545765
CXSG01000022
117777
Actinomycetota
>WENV170545766
CXSG01000022
175949
Actinomycetota
CAT
Met
>WENV170545734
CXSG01000007
227544
Actinomycetota
TAC
Val
>WENV170545735
CXSG01000009
191955
Actinomycetota
TGT
Thr
>WENV170545748
CXSG01000018
280544
Actinomycetota
GTG
His
>WENV170545761
CXSG01000020
280703
Actinomycetota
CCT
Arg
>WENV170545731
CXSG01000003
280450
Actinomycetota
TTT
Lys
>WENV170545769
CXSG01000025
323758
Actinomycetota
CGT
Thr
>WENV170545733
CXSG01000003
358727
Actinomycetota
CCG
Arg
>WENV170545725
CXSG01000001
56451
Actinomycetota
CGA
Ser
>WENV170545771
CXSG01000026
99865
Actinomycetota
CAG
Leu
>WENV170545732
CXSG01000003
222475
Actinomycetota
CTT
Lys
>WENV170545737
CXSG01000010
175843
Actinomycetota
CAA
Leu
>WENV170545729
CXSG01000002
430848
Actinomycetota
CTG
Gln
>WENV170545738
CXSG01000012
179238
Actinomycetota
GAT
Ile
>WENV170545726
CXSG01000001
60767
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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