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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170545877
CXSJ01000036
481233
Actinomycetota
CCC
Gly
>WENV170545890
CXSJ01000070
147829
Actinomycetota
TAA
Leu
>WENV170545865
CXSJ01000011
280498
Actinomycetota
GTT
Asn
>WENV170545866
CXSJ01000013
280498
Actinomycetota
GTT
Asn
>WENV170545933
CXSJ01001164
280498
Actinomycetota
GTT
Asn
>WENV170545943
CXSJ01001301
280498
Actinomycetota
GTT
Asn
>WENV170545919
CXSJ01000301
140768
Actinomycetota
TAG
Leu
>WENV170545901
CXSJ01000181
176075
Actinomycetota
TCT
Arg
>WENV170545868
CXSJ01000019
175848
Actinomycetota
TGG
Pro
>WENV170545867
CXSJ01000016
176078
Actinomycetota
GGG
Pro
>WENV170545884
CXSJ01000052
482604
Actinomycetota
TTG
Gln
>WENV170545892
CXSJ01000074
59689
Actinomycetota
GGA
Ser
>WENV170545872
CXSJ01000033
175837
Actinomycetota
ACG
Arg
>WENV170545873
CXSJ01000033
175837
Actinomycetota
ACG
Arg
>WENV170545938
CXSJ01001182
175837
Actinomycetota
ACG
Arg
>WENV170545939
CXSJ01001182
175837
Actinomycetota
ACG
Arg
>WENV170545876
CXSJ01000034
29393
Actinomycetota
GCT
Ser
>WENV170545864
CXSJ01000009
280549
Actinomycetota
CAC
Val
>WENV170545898
CXSJ01000128
280549
Actinomycetota
CAC
Val
>WENV170545915
CXSJ01000262
280549
Actinomycetota
CAC
Val
>WENV170545920
CXSJ01000439
280549
Actinomycetota
CAC
Val
>WENV170545927
CXSJ01000733
280549
Actinomycetota
CAC
Val
>WENV170545936
CXSJ01001176
280549
Actinomycetota
CAC
Val
>WENV170545941
CXSJ01001297
280549
Actinomycetota
CAC
Val
>WENV170545891
CXSJ01000073
20450
Actinomycetota
GAG
Leu
>WENV170545882
CXSJ01000051
280702
Actinomycetota
GGC
Ala
>WENV170545883
CXSJ01000051
280702
Actinomycetota
GGC
Ala
>WENV170545934
CXSJ01001171
280702
Actinomycetota
GGC
Ala
>WENV170545944
CXSJ01001303
280702
Actinomycetota
GGC
Ala
>WENV170545870
CXSJ01000026
176077
Actinomycetota
CAT
Met
>WENV170545881
CXSJ01000047
280524
Actinomycetota
TGC
Ala
>WENV170545894
CXSJ01000102
398948
Actinomycetota
TTC
Glu
>WENV170545874
CXSJ01000034
117777
Actinomycetota
>WENV170545875
CXSJ01000034
175949
Actinomycetota
CAT
Met
>WENV170545863
CXSJ01000009
418252
Actinomycetota
GAC
Val
>WENV170545914
CXSJ01000262
418252
Actinomycetota
GAC
Val
>WENV170545925
CXSJ01000597
418252
Actinomycetota
GAC
Val
>WENV170545932
CXSJ01001162
418252
Actinomycetota
GAC
Val
>WENV170545935
CXSJ01001176
418252
Actinomycetota
GAC
Val
>WENV170545902
CXSJ01000186
191955
Actinomycetota
TGT
Thr
>WENV170545922
CXSJ01000441
191955
Actinomycetota
TGT
Thr
>WENV170545878
CXSJ01000041
280544
Actinomycetota
GTG
His
>WENV170545860
CXSJ01000004
280703
Actinomycetota
CCT
Arg
>WENV170545897
CXSJ01000108
280450
Actinomycetota
TTT
Lys
>WENV170545918
CXSJ01000301
323758
Actinomycetota
CGT
Thr
>WENV170545896
CXSJ01000108
56451
Actinomycetota
CGA
Ser
>WENV170545900
CXSJ01000143
99865
Actinomycetota
CAG
Leu
>WENV170545885
CXSJ01000062
222475
Actinomycetota
CTT
Lys
>WENV170545879
CXSJ01000044
175843
Actinomycetota
CAA
Leu
>WENV170545886
CXSJ01000066
317680
Actinomycetota
CCG
Arg
>WENV170545917
CXSJ01000294
430848
Actinomycetota
CTG
Gln
>WENV170545916
CXSJ01000294
289788
Actinomycetota
CTC
Glu
>WENV170545880
CXSJ01000047
179238
Actinomycetota
GAT
Ile
>WENV170545903
CXSJ01000192
60767
Actinomycetota
TGA
Ser
>WENV170545871
CXSJ01000031
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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