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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170545949
CXSK01000012
481233
Actinomycetota
CCC
Gly
>WENV170545958
CXSK01000057
147829
Actinomycetota
TAA
Leu
>WENV170545983
CXSK01000165
280498
Actinomycetota
GTT
Asn
>WENV170545989
CXSK01000206
280498
Actinomycetota
GTT
Asn
>WENV170545969
CXSK01000119
140768
Actinomycetota
TAG
Leu
>WENV170545964
CXSK01000093
176075
Actinomycetota
TCT
Arg
>WENV170545965
CXSK01000095
175848
Actinomycetota
TGG
Pro
>WENV170545984
CXSK01000167
176078
Actinomycetota
GGG
Pro
>WENV170545985
CXSK01000182
482604
Actinomycetota
TTG
Gln
>WENV170545980
CXSK01000164
59689
Actinomycetota
GGA
Ser
>WENV170545990
CXSK01000215
175837
Actinomycetota
ACG
Arg
>WENV170545999
CXSK01000471
175837
Actinomycetota
ACG
Arg
>WENV170546000
CXSK01000471
175837
Actinomycetota
ACG
Arg
>WENV170545961
CXSK01000064
29393
Actinomycetota
GCT
Ser
>WENV170545974
CXSK01000132
280549
Actinomycetota
CAC
Val
>WENV170545978
CXSK01000136
280549
Actinomycetota
CAC
Val
>WENV170545981
CXSK01000164
349164
Actinomycetota
CTC
Glu
>WENV170545946
CXSK01000006
20450
Actinomycetota
GAG
Leu
>WENV170545986
CXSK01000189
280702
Actinomycetota
GGC
Ala
>WENV170545973
CXSK01000132
434162
Actinomycetota
GAC
Val
>WENV170545977
CXSK01000136
434162
Actinomycetota
GAC
Val
>WENV170545948
CXSK01000007
176077
Actinomycetota
CAT
Met
>WENV170545953
CXSK01000027
280524
Actinomycetota
TGC
Ala
>WENV170545987
CXSK01000197
398948
Actinomycetota
TTC
Glu
>WENV170545959
CXSK01000064
117777
Actinomycetota
>WENV170545960
CXSK01000064
175949
Actinomycetota
CAT
Met
>WENV170545979
CXSK01000163
227544
Actinomycetota
TAC
Val
>WENV170545951
CXSK01000015
280544
Actinomycetota
GTG
His
>WENV170545967
CXSK01000096
280703
Actinomycetota
CCT
Arg
>WENV170545954
CXSK01000037
280450
Actinomycetota
TTT
Lys
>WENV170545968
CXSK01000119
323758
Actinomycetota
CGT
Thr
>WENV170545963
CXSK01000079
358727
Actinomycetota
CCG
Arg
>WENV170545945
CXSK01000003
56451
Actinomycetota
CGA
Ser
>WENV170545950
CXSK01000012
99865
Actinomycetota
CAG
Leu
>WENV170545970
CXSK01000122
222475
Actinomycetota
CTT
Lys
>WENV170545966
CXSK01000095
175843
Actinomycetota
CAA
Leu
>WENV170545982
CXSK01000164
430848
Actinomycetota
CTG
Gln
>WENV170545952
CXSK01000027
179238
Actinomycetota
GAT
Ile
>WENV170545956
CXSK01000044
60767
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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