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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170546141
CXSN01003047
147829
Actinomycetota
TAA
Leu
>WENV170546142
CXSN01003353
59689
Actinomycetota
GGA
Ser
>WENV170546117
CXSN01001714
175837
Actinomycetota
ACG
Arg
>WENV170546118
CXSN01001714
175837
Actinomycetota
ACG
Arg
>WENV170546143
CXSN01003675
29393
Actinomycetota
GCT
Ser
>WENV170546132
CXSN01002890
280702
Actinomycetota
GGC
Ala
>WENV170546116
CXSN01001558
176077
Actinomycetota
CAT
Met
>WENV170546147
CXSN01004281
398948
Actinomycetota
TTC
Glu
>WENV170546146
CXSN01003812
418252
Actinomycetota
GAC
Val
>WENV170546104
CXSN01000369
280703
Actinomycetota
CCT
Arg
>WENV170546115
CXSN01001557
280450
Actinomycetota
TTT
Lys
>WENV170546150
CXSN01007075
175843
Actinomycetota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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