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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170546587
CXSW01000015
481233
Actinomycetota
CCC
Gly
>WENV170546591
CXSW01000020
147829
Actinomycetota
TAA
Leu
>WENV170546613
CXSW01000045
280498
Actinomycetota
GTT
Asn
>WENV170546614
CXSW01000045
280498
Actinomycetota
GTT
Asn
>WENV170546583
CXSW01000008
140768
Actinomycetota
TAG
Leu
>WENV170546580
CXSW01000005
176075
Actinomycetota
TCT
Arg
>WENV170546593
CXSW01000020
175848
Actinomycetota
TGG
Pro
>WENV170546606
CXSW01000027
176078
Actinomycetota
GGG
Pro
>WENV170546612
CXSW01000036
59689
Actinomycetota
GGA
Ser
>WENV170546616
CXSW01000047
175837
Actinomycetota
ACG
Arg
>WENV170546622
CXSW01000131
175837
Actinomycetota
ACG
Arg
>WENV170546623
CXSW01000131
175837
Actinomycetota
ACG
Arg
>WENV170546600
CXSW01000025
29393
Actinomycetota
GCT
Ser
>WENV170546604
CXSW01000027
280549
Actinomycetota
CAC
Val
>WENV170546621
CXSW01000069
280549
Actinomycetota
CAC
Val
>WENV170546608
CXSW01000036
349164
Actinomycetota
CTC
Glu
>WENV170546581
CXSW01000006
20450
Actinomycetota
GAG
Leu
>WENV170546615
CXSW01000047
280702
Actinomycetota
GGC
Ala
>WENV170546618
CXSW01000050
280702
Actinomycetota
GGC
Ala
>WENV170546603
CXSW01000027
434162
Actinomycetota
GAC
Val
>WENV170546620
CXSW01000069
434162
Actinomycetota
GAC
Val
>WENV170546574
CXSW01000001
176077
Actinomycetota
CAT
Met
>WENV170546590
CXSW01000018
280524
Actinomycetota
TGC
Ala
>WENV170546595
CXSW01000021
398948
Actinomycetota
TTC
Glu
>WENV170546598
CXSW01000025
117777
Actinomycetota
>WENV170546599
CXSW01000025
175949
Actinomycetota
CAT
Met
>WENV170546579
CXSW01000004
227544
Actinomycetota
TAC
Val
>WENV170546607
CXSW01000033
191955
Actinomycetota
TGT
Thr
>WENV170546597
CXSW01000024
280544
Actinomycetota
GTG
His
>WENV170546575
CXSW01000001
280703
Actinomycetota
CCT
Arg
>WENV170546610
CXSW01000036
280450
Actinomycetota
TTT
Lys
>WENV170546582
CXSW01000008
323758
Actinomycetota
CGT
Thr
>WENV170546584
CXSW01000010
358727
Actinomycetota
CCG
Arg
>WENV170546576
CXSW01000003
56451
Actinomycetota
CGA
Ser
>WENV170546588
CXSW01000015
99865
Actinomycetota
CAG
Leu
>WENV170546611
CXSW01000036
222475
Actinomycetota
CTT
Lys
>WENV170546592
CXSW01000020
175843
Actinomycetota
CAA
Leu
>WENV170546609
CXSW01000036
430848
Actinomycetota
CTG
Gln
>WENV170546589
CXSW01000018
179238
Actinomycetota
GAT
Ile
>WENV170546577
CXSW01000003
60767
Actinomycetota
TGA
Ser
>WENV170546617
CXSW01000050
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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