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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170546650
CXSX01000031
481233
Actinomycetota
CCC
Gly
>WENV170546628
CXSX01000002
147829
Actinomycetota
TAA
Leu
>WENV170546642
CXSX01000025
280498
Actinomycetota
GTT
Asn
>WENV170546643
CXSX01000025
280498
Actinomycetota
GTT
Asn
>WENV170546625
CXSX01000001
140768
Actinomycetota
TAG
Leu
>WENV170546641
CXSX01000024
176075
Actinomycetota
TCT
Arg
>WENV170546627
CXSX01000002
175848
Actinomycetota
TGG
Pro
>WENV170546670
CXSX01000078
176078
Actinomycetota
GGG
Pro
>WENV170546626
CXSX01000002
482604
Actinomycetota
TTG
Gln
>WENV170546659
CXSX01000047
175837
Actinomycetota
ACG
Arg
>WENV170546673
CXSX01000178
175837
Actinomycetota
ACG
Arg
>WENV170546674
CXSX01000178
175837
Actinomycetota
ACG
Arg
>WENV170546640
CXSX01000021
29393
Actinomycetota
GCT
Ser
>WENV170546653
CXSX01000032
280549
Actinomycetota
CAC
Val
>WENV170546666
CXSX01000073
280549
Actinomycetota
CAC
Val
>WENV170546658
CXSX01000040
20450
Actinomycetota
GAG
Leu
>WENV170546634
CXSX01000011
280441
Actinomycetota
CCG
Arg
>WENV170546668
CXSX01000074
280702
Actinomycetota
GGC
Ala
>WENV170546669
CXSX01000074
280702
Actinomycetota
GGC
Ala
>WENV170546646
CXSX01000028
176077
Actinomycetota
CAT
Met
>WENV170546632
CXSX01000007
184564
Actinomycetota
CTT
Lys
>WENV170546656
CXSX01000035
280524
Actinomycetota
TGC
Ala
>WENV170546647
CXSX01000028
398948
Actinomycetota
TTC
Glu
>WENV170546638
CXSX01000021
117777
Actinomycetota
>WENV170546639
CXSX01000021
175949
Actinomycetota
CAT
Met
>WENV170546654
CXSX01000034
191955
Actinomycetota
TGT
Thr
>WENV170546636
CXSX01000013
280544
Actinomycetota
GTG
His
>WENV170546657
CXSX01000037
280703
Actinomycetota
CCT
Arg
>WENV170546631
CXSX01000007
280450
Actinomycetota
TTT
Lys
>WENV170546648
CXSX01000030
56451
Actinomycetota
CGA
Ser
>WENV170546662
CXSX01000062
58099
Actinomycetota
TGA
Ser
>WENV170546649
CXSX01000031
99865
Actinomycetota
CAG
Leu
>WENV170546672
CXSX01000094
398853
Actinomycetota
CTG
Gln
>WENV170546629
CXSX01000002
175843
Actinomycetota
CAA
Leu
>WENV170546671
CXSX01000094
289788
Actinomycetota
CTC
Glu
>WENV170546655
CXSX01000035
179238
Actinomycetota
GAT
Ile
>WENV170546624
CXSX01000001
280470
Actinomycetota
CGT
Thr
>WENV170546630
CXSX01000005
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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