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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170546837
CXTB01000006
481233
Actinomycetota
CCC
Gly
>WENV170546841
CXTB01000008
147829
Actinomycetota
TAA
Leu
>WENV170546855
CXTB01000023
280498
Actinomycetota
GTT
Asn
>WENV170546856
CXTB01000023
280498
Actinomycetota
GTT
Asn
>WENV170546862
CXTB01000028
140768
Actinomycetota
TAG
Leu
>WENV170546874
CXTB01000040
176075
Actinomycetota
TCT
Arg
>WENV170546839
CXTB01000008
175848
Actinomycetota
TGG
Pro
>WENV170546873
CXTB01000037
176078
Actinomycetota
GGG
Pro
>WENV170546865
CXTB01000032
59689
Actinomycetota
GGA
Ser
>WENV170546845
CXTB01000008
175837
Actinomycetota
ACG
Arg
>WENV170546846
CXTB01000008
175837
Actinomycetota
ACG
Arg
>WENV170546835
CXTB01000005
29393
Actinomycetota
GCT
Ser
>WENV170546832
CXTB01000005
280549
Actinomycetota
CAC
Val
>WENV170546871
CXTB01000037
280549
Actinomycetota
CAC
Val
>WENV170546863
CXTB01000031
349164
Actinomycetota
CTC
Glu
>WENV170546854
CXTB01000018
20450
Actinomycetota
GAG
Leu
>WENV170546843
CXTB01000008
280702
Actinomycetota
GGC
Ala
>WENV170546844
CXTB01000008
280702
Actinomycetota
GGC
Ala
>WENV170546831
CXTB01000005
434162
Actinomycetota
GAC
Val
>WENV170546870
CXTB01000037
434162
Actinomycetota
GAC
Val
>WENV170546826
CXTB01000003
176077
Actinomycetota
CAT
Met
>WENV170546858
CXTB01000024
280524
Actinomycetota
TGC
Ala
>WENV170546852
CXTB01000015
398948
Actinomycetota
TTC
Glu
>WENV170546833
CXTB01000005
117777
Actinomycetota
>WENV170546834
CXTB01000005
175949
Actinomycetota
CAT
Met
>WENV170546840
CXTB01000008
227544
Actinomycetota
TAC
Val
>WENV170546866
CXTB01000033
191955
Actinomycetota
TGT
Thr
>WENV170546859
CXTB01000025
280544
Actinomycetota
GTG
His
>WENV170546827
CXTB01000003
280703
Actinomycetota
CCT
Arg
>WENV170546848
CXTB01000012
280450
Actinomycetota
TTT
Lys
>WENV170546861
CXTB01000028
323758
Actinomycetota
CGT
Thr
>WENV170546875
CXTB01000043
358727
Actinomycetota
CCG
Arg
>WENV170546853
CXTB01000016
56451
Actinomycetota
CGA
Ser
>WENV170546836
CXTB01000006
99865
Actinomycetota
CAG
Leu
>WENV170546849
CXTB01000012
222475
Actinomycetota
CTT
Lys
>WENV170546842
CXTB01000008
175843
Actinomycetota
CAA
Leu
>WENV170546864
CXTB01000031
430848
Actinomycetota
CTG
Gln
>WENV170546857
CXTB01000024
179238
Actinomycetota
GAT
Ile
>WENV170546828
CXTB01000004
60767
Actinomycetota
TGA
Ser
>WENV170546838
CXTB01000008
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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