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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170546952
CXTD01000035
481233
Actinomycetota
CCC
Gly
>WENV170546964
CXTD01000071
147829
Actinomycetota
TAA
Leu
>WENV170546944
CXTD01000015
280498
Actinomycetota
GTT
Asn
>WENV170546975
CXTD01000199
280498
Actinomycetota
GTT
Asn
>WENV170546976
CXTD01000199
280498
Actinomycetota
GTT
Asn
>WENV170546967
CXTD01000080
140768
Actinomycetota
TAG
Leu
>WENV170546950
CXTD01000030
176075
Actinomycetota
TCT
Arg
>WENV170546940
CXTD01000009
175848
Actinomycetota
TGG
Pro
>WENV170546938
CXTD01000006
176078
Actinomycetota
GGG
Pro
>WENV170546965
CXTD01000072
59689
Actinomycetota
GGA
Ser
>WENV170546954
CXTD01000037
175837
Actinomycetota
ACG
Arg
>WENV170546955
CXTD01000037
175837
Actinomycetota
ACG
Arg
>WENV170546931
CXTD01000001
29393
Actinomycetota
GCT
Ser
>WENV170546928
CXTD01000001
280549
Actinomycetota
CAC
Val
>WENV170546936
CXTD01000006
280549
Actinomycetota
CAC
Val
>WENV170546973
CXTD01000149
349164
Actinomycetota
CTC
Glu
>WENV170546962
CXTD01000056
20450
Actinomycetota
GAG
Leu
>WENV170546969
CXTD01000088
280702
Actinomycetota
GGC
Ala
>WENV170546970
CXTD01000088
280702
Actinomycetota
GGC
Ala
>WENV170546927
CXTD01000001
434162
Actinomycetota
GAC
Val
>WENV170546935
CXTD01000006
434162
Actinomycetota
GAC
Val
>WENV170546956
CXTD01000041
176077
Actinomycetota
CAT
Met
>WENV170546958
CXTD01000048
280524
Actinomycetota
TGC
Ala
>WENV170546960
CXTD01000053
398948
Actinomycetota
TTC
Glu
>WENV170546929
CXTD01000001
117777
Actinomycetota
>WENV170546930
CXTD01000001
175949
Actinomycetota
CAT
Met
>WENV170546963
CXTD01000058
227544
Actinomycetota
TAC
Val
>WENV170546932
CXTD01000002
191955
Actinomycetota
TGT
Thr
>WENV170546946
CXTD01000024
280544
Actinomycetota
GTG
His
>WENV170546945
CXTD01000016
280703
Actinomycetota
CCT
Arg
>WENV170546968
CXTD01000082
280450
Actinomycetota
TTT
Lys
>WENV170546966
CXTD01000080
323758
Actinomycetota
CGT
Thr
>WENV170546948
CXTD01000026
358727
Actinomycetota
CCG
Arg
>WENV170546939
CXTD01000007
56451
Actinomycetota
CGA
Ser
>WENV170546953
CXTD01000035
99865
Actinomycetota
CAG
Leu
>WENV170546947
CXTD01000026
222475
Actinomycetota
CTT
Lys
>WENV170546941
CXTD01000009
175843
Actinomycetota
CAA
Leu
>WENV170546974
CXTD01000149
430848
Actinomycetota
CTG
Gln
>WENV170546957
CXTD01000048
179238
Actinomycetota
GAT
Ile
>WENV170546942
CXTD01000013
60767
Actinomycetota
TGA
Ser
>WENV170546971
CXTD01000088
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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