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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170547063
CXTF01000030
481233
Actinomycetota
CCC
Gly
>WENV170547047
CXTF01000009
147829
Actinomycetota
TAA
Leu
>WENV170547054
CXTF01000011
280498
Actinomycetota
GTT
Asn
>WENV170547055
CXTF01000011
280498
Actinomycetota
GTT
Asn
>WENV170547036
CXTF01000002
140768
Actinomycetota
TAG
Leu
>WENV170547042
CXTF01000004
176075
Actinomycetota
TCT
Arg
>WENV170547028
CXTF01000001
175848
Actinomycetota
TGG
Pro
>WENV170547053
CXTF01000011
176078
Actinomycetota
GGG
Pro
>WENV170547027
CXTF01000001
482604
Actinomycetota
TTG
Gln
>WENV170547032
CXTF01000001
175837
Actinomycetota
ACG
Arg
>WENV170547077
CXTF01000154
175837
Actinomycetota
ACG
Arg
>WENV170547078
CXTF01000154
175837
Actinomycetota
ACG
Arg
>WENV170547076
CXTF01000093
29393
Actinomycetota
GCT
Ser
>WENV170547061
CXTF01000026
29393
Actinomycetota
GCT
Ser
>WENV170547051
CXTF01000011
280549
Actinomycetota
CAC
Val
>WENV170547067
CXTF01000045
280549
Actinomycetota
CAC
Val
>WENV170547070
CXTF01000048
20450
Actinomycetota
GAG
Leu
>WENV170547033
CXTF01000002
280441
Actinomycetota
CCG
Arg
>WENV170547030
CXTF01000001
280702
Actinomycetota
GGC
Ala
>WENV170547031
CXTF01000001
280702
Actinomycetota
GGC
Ala
>WENV170547072
CXTF01000056
176077
Actinomycetota
CAT
Met
>WENV170547069
CXTF01000046
184564
Actinomycetota
CTT
Lys
>WENV170547046
CXTF01000008
280524
Actinomycetota
TGC
Ala
>WENV170547057
CXTF01000024
398948
Actinomycetota
TTC
Glu
>WENV170547059
CXTF01000026
117777
Actinomycetota
>WENV170547060
CXTF01000026
175949
Actinomycetota
CAT
Met
>WENV170547064
CXTF01000037
191955
Actinomycetota
TGT
Thr
>WENV170547041
CXTF01000004
280544
Actinomycetota
GTG
His
>WENV170547044
CXTF01000007
280703
Actinomycetota
CCT
Arg
>WENV170547068
CXTF01000046
280450
Actinomycetota
TTT
Lys
>WENV170547039
CXTF01000003
56451
Actinomycetota
CGA
Ser
>WENV170547040
CXTF01000003
58099
Actinomycetota
TGA
Ser
>WENV170547062
CXTF01000030
99865
Actinomycetota
CAG
Leu
>WENV170547074
CXTF01000061
398853
Actinomycetota
CTG
Gln
>WENV170547029
CXTF01000001
175843
Actinomycetota
CAA
Leu
>WENV170547073
CXTF01000061
289788
Actinomycetota
CTC
Glu
>WENV170547045
CXTF01000008
179238
Actinomycetota
GAT
Ile
>WENV170547035
CXTF01000002
280470
Actinomycetota
CGT
Thr
>WENV170547058
CXTF01000025
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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