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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170548974
CXUS01000013
481233
Actinomycetota
CCC
Gly
>WENV170548985
CXUS01000034
147829
Actinomycetota
TAA
Leu
>WENV170548968
CXUS01000010
280498
Actinomycetota
GTT
Asn
>WENV170548969
CXUS01000010
280498
Actinomycetota
GTT
Asn
>WENV170548956
CXUS01000008
140768
Actinomycetota
TAG
Leu
>WENV170548952
CXUS01000006
176075
Actinomycetota
TCT
Arg
>WENV170548983
CXUS01000029
175848
Actinomycetota
TGG
Pro
>WENV170548967
CXUS01000010
176078
Actinomycetota
GGG
Pro
>WENV170548961
CXUS01000009
59689
Actinomycetota
GGA
Ser
>WENV170548980
CXUS01000029
175837
Actinomycetota
ACG
Arg
>WENV170548981
CXUS01000029
175837
Actinomycetota
ACG
Arg
>WENV170548950
CXUS01000004
29393
Actinomycetota
GCT
Ser
>WENV170548947
CXUS01000004
280549
Actinomycetota
CAC
Val
>WENV170548965
CXUS01000010
280549
Actinomycetota
CAC
Val
>WENV170548957
CXUS01000009
349164
Actinomycetota
CTC
Glu
>WENV170548937
CXUS01000001
20450
Actinomycetota
GAG
Leu
>WENV170548979
CXUS01000029
280702
Actinomycetota
GGC
Ala
>WENV170548986
CXUS01000055
280702
Actinomycetota
GGC
Ala
>WENV170548946
CXUS01000004
434162
Actinomycetota
GAC
Val
>WENV170548964
CXUS01000010
434162
Actinomycetota
GAC
Val
>WENV170548940
CXUS01000002
176077
Actinomycetota
CAT
Met
>WENV170548977
CXUS01000021
280524
Actinomycetota
TGC
Ala
>WENV170548944
CXUS01000002
398948
Actinomycetota
TTC
Glu
>WENV170548948
CXUS01000004
117777
Actinomycetota
>WENV170548949
CXUS01000004
175949
Actinomycetota
CAT
Met
>WENV170548975
CXUS01000017
227544
Actinomycetota
TAC
Val
>WENV170548984
CXUS01000031
191955
Actinomycetota
TGT
Thr
>WENV170548953
CXUS01000006
280544
Actinomycetota
GTG
His
>WENV170548941
CXUS01000002
280703
Actinomycetota
CCT
Arg
>WENV170548959
CXUS01000009
280450
Actinomycetota
TTT
Lys
>WENV170548955
CXUS01000008
323758
Actinomycetota
CGT
Thr
>WENV170548942
CXUS01000002
358727
Actinomycetota
CCG
Arg
>WENV170548971
CXUS01000011
56451
Actinomycetota
CGA
Ser
>WENV170548973
CXUS01000013
99865
Actinomycetota
CAG
Leu
>WENV170548960
CXUS01000009
222475
Actinomycetota
CTT
Lys
>WENV170548978
CXUS01000029
175843
Actinomycetota
CAA
Leu
>WENV170548958
CXUS01000009
430848
Actinomycetota
CTG
Gln
>WENV170548976
CXUS01000021
179238
Actinomycetota
GAT
Ile
>WENV170548972
CXUS01000011
60767
Actinomycetota
TGA
Ser
>WENV170548982
CXUS01000029
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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