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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170549904
CXVK01000029
481233
Actinomycetota
CCC
Gly
>WENV170549871
CXVK01000001
147829
Actinomycetota
TAA
Leu
>WENV170549875
CXVK01000005
280498
Actinomycetota
GTT
Asn
>WENV170549876
CXVK01000005
280498
Actinomycetota
GTT
Asn
>WENV170549874
CXVK01000004
140768
Actinomycetota
TAG
Leu
>WENV170549910
CXVK01000037
176075
Actinomycetota
TCT
Arg
>WENV170549906
CXVK01000031
175848
Actinomycetota
TGG
Pro
>WENV170549901
CXVK01000027
176078
Actinomycetota
GGG
Pro
>WENV170549907
CXVK01000035
59689
Actinomycetota
GGA
Ser
>WENV170549902
CXVK01000028
175837
Actinomycetota
ACG
Arg
>WENV170549903
CXVK01000028
175837
Actinomycetota
ACG
Arg
>WENV170549895
CXVK01000022
29393
Actinomycetota
GCT
Ser
>WENV170549892
CXVK01000022
280549
Actinomycetota
CAC
Val
>WENV170549899
CXVK01000027
280549
Actinomycetota
CAC
Val
>WENV170549908
CXVK01000035
349164
Actinomycetota
CTC
Glu
>WENV170549912
CXVK01000041
20450
Actinomycetota
GAG
Leu
>WENV170549917
CXVK01000054
280702
Actinomycetota
GGC
Ala
>WENV170549918
CXVK01000054
280702
Actinomycetota
GGC
Ala
>WENV170549891
CXVK01000022
434162
Actinomycetota
GAC
Val
>WENV170549898
CXVK01000027
434162
Actinomycetota
GAC
Val
>WENV170549880
CXVK01000008
176077
Actinomycetota
CAT
Met
>WENV170549888
CXVK01000019
280524
Actinomycetota
TGC
Ala
>WENV170549915
CXVK01000051
398948
Actinomycetota
TTC
Glu
>WENV170549893
CXVK01000022
117777
Actinomycetota
>WENV170549894
CXVK01000022
175949
Actinomycetota
CAT
Met
>WENV170549870
CXVK01000001
227544
Actinomycetota
TAC
Val
>WENV170549889
CXVK01000020
191955
Actinomycetota
TGT
Thr
>WENV170549911
CXVK01000039
280544
Actinomycetota
GTG
His
>WENV170549872
CXVK01000003
280703
Actinomycetota
CCT
Arg
>WENV170549883
CXVK01000012
280450
Actinomycetota
TTT
Lys
>WENV170549873
CXVK01000004
323758
Actinomycetota
CGT
Thr
>WENV170549877
CXVK01000006
358727
Actinomycetota
CCG
Arg
>WENV170549881
CXVK01000010
56451
Actinomycetota
CGA
Ser
>WENV170549884
CXVK01000012
222475
Actinomycetota
CTT
Lys
>WENV170549914
CXVK01000050
175843
Actinomycetota
CAA
Leu
>WENV170549909
CXVK01000035
430848
Actinomycetota
CTG
Gln
>WENV170549887
CXVK01000019
179238
Actinomycetota
GAT
Ile
>WENV170549882
CXVK01000010
60767
Actinomycetota
TGA
Ser
>WENV170549885
CXVK01000013
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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