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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170550113
CXVP01000034
481233
Actinomycetota
CCC
Gly
>WENV170550141
CXVP01000118
147829
Actinomycetota
TAA
Leu
>WENV170550133
CXVP01000071
280498
Actinomycetota
GTT
Asn
>WENV170550134
CXVP01000071
280498
Actinomycetota
GTT
Asn
>WENV170550129
CXVP01000061
140768
Actinomycetota
TAG
Leu
>WENV170550138
CXVP01000115
176075
Actinomycetota
TCT
Arg
>WENV170550146
CXVP01000129
175848
Actinomycetota
TGG
Pro
>WENV170550142
CXVP01000123
176078
Actinomycetota
GGG
Pro
>WENV170550145
CXVP01000126
482604
Actinomycetota
TTG
Gln
>WENV170550110
CXVP01000027
59689
Actinomycetota
GGA
Ser
>WENV170550143
CXVP01000124
175837
Actinomycetota
ACG
Arg
>WENV170550144
CXVP01000124
175837
Actinomycetota
ACG
Arg
>WENV170550108
CXVP01000016
29393
Actinomycetota
GCT
Ser
>WENV170550127
CXVP01000053
280549
Actinomycetota
CAC
Val
>WENV170550150
CXVP01000130
280549
Actinomycetota
CAC
Val
>WENV170550136
CXVP01000093
20450
Actinomycetota
GAG
Leu
>WENV170550139
CXVP01000117
280702
Actinomycetota
GGC
Ala
>WENV170550140
CXVP01000117
280702
Actinomycetota
GGC
Ala
>WENV170550123
CXVP01000042
176077
Actinomycetota
CAT
Met
>WENV170550120
CXVP01000042
398948
Actinomycetota
TTC
Glu
>WENV170550106
CXVP01000016
117777
Actinomycetota
>WENV170550107
CXVP01000016
175949
Actinomycetota
CAT
Met
>WENV170550126
CXVP01000053
418252
Actinomycetota
GAC
Val
>WENV170550149
CXVP01000130
418252
Actinomycetota
GAC
Val
>WENV170550111
CXVP01000029
191955
Actinomycetota
TGT
Thr
>WENV170550152
CXVP01000146
280544
Actinomycetota
GTG
His
>WENV170550104
CXVP01000002
280703
Actinomycetota
CCT
Arg
>WENV170550117
CXVP01000038
280450
Actinomycetota
TTT
Lys
>WENV170550128
CXVP01000061
323758
Actinomycetota
CGT
Thr
>WENV170550115
CXVP01000036
56451
Actinomycetota
CGA
Ser
>WENV170550114
CXVP01000034
99865
Actinomycetota
CAG
Leu
>WENV170550118
CXVP01000038
222475
Actinomycetota
CTT
Lys
>WENV170550105
CXVP01000011
175843
Actinomycetota
CAA
Leu
>WENV170550137
CXVP01000095
317680
Actinomycetota
CCG
Arg
>WENV170550132
CXVP01000063
430848
Actinomycetota
CTG
Gln
>WENV170550131
CXVP01000063
289788
Actinomycetota
CTC
Glu
>WENV170550109
CXVP01000024
179238
Actinomycetota
GAT
Ile
>WENV170550116
CXVP01000036
60767
Actinomycetota
TGA
Ser
>WENV170550135
CXVP01000086
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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