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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170550497
CXVY01000037
481233
Actinomycetota
CCC
Gly
>WENV170550510
CXVY01000069
147829
Actinomycetota
TAA
Leu
>WENV170550496
CXVY01000035
280498
Actinomycetota
GTT
Asn
>WENV170550532
CXVY01000305
280498
Actinomycetota
GTT
Asn
>WENV170550515
CXVY01000081
295964
Actinomycetota
GTT
Asn
>WENV170550541
CXVY01000430
295964
Actinomycetota
GTT
Asn
>WENV170550491
CXVY01000029
140768
Actinomycetota
TAG
Leu
>WENV170550484
CXVY01000016
176075
Actinomycetota
TCT
Arg
>WENV170550519
CXVY01000120
175848
Actinomycetota
TGG
Pro
>WENV170550480
CXVY01000007
176078
Actinomycetota
GGG
Pro
>WENV170550516
CXVY01000090
482604
Actinomycetota
TTG
Gln
>WENV170550476
CXVY01000005
175837
Actinomycetota
ACG
Arg
>WENV170550477
CXVY01000005
175837
Actinomycetota
ACG
Arg
>WENV170550486
CXVY01000022
175837
Actinomycetota
ACG
Arg
>WENV170550533
CXVY01000342
175837
Actinomycetota
ACG
Arg
>WENV170550534
CXVY01000342
175837
Actinomycetota
ACG
Arg
>WENV170550514
CXVY01000073
29393
Actinomycetota
GCT
Ser
>WENV170550501
CXVY01000041
280549
Actinomycetota
CAC
Val
>WENV170550530
CXVY01000236
280549
Actinomycetota
CAC
Val
>WENV170550537
CXVY01000400
280549
Actinomycetota
CAC
Val
>WENV170550489
CXVY01000026
20450
Actinomycetota
GAG
Leu
>WENV170550493
CXVY01000031
280441
Actinomycetota
CCG
Arg
>WENV170550474
CXVY01000005
280702
Actinomycetota
GGC
Ala
>WENV170550475
CXVY01000005
280702
Actinomycetota
GGC
Ala
>WENV170550482
CXVY01000011
176077
Actinomycetota
CAT
Met
>WENV170550488
CXVY01000022
184564
Actinomycetota
CTT
Lys
>WENV170550525
CXVY01000155
280524
Actinomycetota
TGC
Ala
>WENV170550521
CXVY01000121
398948
Actinomycetota
TTC
Glu
>WENV170550512
CXVY01000073
117777
Actinomycetota
>WENV170550513
CXVY01000073
175949
Actinomycetota
CAT
Met
>WENV170550503
CXVY01000043
191955
Actinomycetota
TGT
Thr
>WENV170550495
CXVY01000032
280544
Actinomycetota
GTG
His
>WENV170550483
CXVY01000011
280703
Actinomycetota
CCT
Arg
>WENV170550487
CXVY01000022
280450
Actinomycetota
TTT
Lys
>WENV170550504
CXVY01000054
56451
Actinomycetota
CGA
Ser
>WENV170550505
CXVY01000054
58099
Actinomycetota
TGA
Ser
>WENV170550498
CXVY01000037
99865
Actinomycetota
CAG
Leu
>WENV170550523
CXVY01000152
398853
Actinomycetota
CTG
Gln
>WENV170550511
CXVY01000069
175843
Actinomycetota
CAA
Leu
>WENV170550522
CXVY01000152
289788
Actinomycetota
CTC
Glu
>WENV170550524
CXVY01000155
179238
Actinomycetota
GAT
Ile
>WENV170550490
CXVY01000029
280470
Actinomycetota
CGT
Thr
>WENV170550478
CXVY01000006
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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