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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180008417
FLSB01027135
184065
Actinomycetota
TGG
Pro
>WENV180009067
FLSB01302922
184065
Actinomycetota
TGG
Pro
>WENV180008325
FLSB01015289
194706
Actinomycetota
CAT
Met
>WENV180008295
FLSB01012083
284890
Actinomycetota
CTT
Lys
>WENV180008672
FLSB01096591
284890
Actinomycetota
CTT
Lys
>WENV180008946
FLSB01241665
284890
Actinomycetota
CTT
Lys
>WENV180009026
FLSB01281270
284890
Actinomycetota
CTT
Lys
>WENV180009027
FLSB01281270
284890
Actinomycetota
CTT
Lys
>WENV180007936
FLSB01001397
284889
Actinomycetota
CTC
Glu
>WENV180008449
FLSB01031661
284889
Actinomycetota
CTC
Glu
>WENV180008899
FLSB01209626
284889
Actinomycetota
CTC
Glu
>WENV180008190
FLSB01005168
184493
Actinomycetota
GGG
Pro
>WENV180008864
FLSB01184167
443526
Actinomycetota
CAC
Val
>WENV180009042
FLSB01290080
443526
Actinomycetota
CAC
Val
>WENV180009161
FLSB01331214
443526
Actinomycetota
CAC
Val
>WENV180008203
FLSB01005628
285880
Actinomycetota
TCT
Arg
>WENV180008142
FLSB01003778
292656
Actinomycetota
ACG
Arg
>WENV180008745
FLSB01120949
47453
Actinomycetota
GAG
Leu
>WENV180008647
FLSB01087286
176353
Actinomycetota
CAA
Leu
>WENV180007934
FLSB01001366
285876
Actinomycetota
CGT
Thr
>WENV180008341
FLSB01016754
180944
Actinomycetota
GTC
Asp
>WENV180008599
FLSB01071210
402794
Actinomycetota
TCC
Gly
>WENV180009049
FLSB01295489
179433
Actinomycetota
TAA
Leu
>WENV180008369
FLSB01019745
507958
Actinomycetota
CCC
Gly
>WENV180008904
FLSB01210528
280988
Actinomycetota
TAC
Val
>WENV180007907
FLSB01001057
287251
Actinomycetota
CTT
Lys
>WENV180009195
FLSB01331836
180071
Actinomycetota
CAT
Met
>WENV180008708
FLSB01110202
312253
Actinomycetota
TGC
Ala
>WENV180008140
FLSB01003775
221845
Actinomycetota
GAT
Ile
>WENV180008881
FLSB01195748
343259
Actinomycetota
TTC
Glu
>WENV180008169
FLSB01004453
285877
Actinomycetota
CCG
Arg
>WENV180008474
FLSB01036157
187640
Actinomycetota
TGT
Thr
>WENV180008941
FLSB01238118
187640
Actinomycetota
TGT
Thr
>WENV180007835
FLSB01000176
180945
Actinomycetota
CAT
Met
>WENV180008390
FLSB01024037
284887
Actinomycetota
GCC
Gly
>WENV180008447
FLSB01031661
284887
Actinomycetota
GCC
Gly
>WENV180008457
FLSB01034216
284887
Actinomycetota
GCC
Gly
>WENV180008525
FLSB01050632
284887
Actinomycetota
GCC
Gly
>WENV180008617
FLSB01076914
284887
Actinomycetota
GCC
Gly
>WENV180008685
FLSB01101031
284887
Actinomycetota
GCC
Gly
>WENV180008897
FLSB01209626
284887
Actinomycetota
GCC
Gly
>WENV180008176
FLSB01004581
292678
Actinomycetota
CTT
Lys
>WENV180008177
FLSB01004581
292678
Actinomycetota
CTT
Lys
>WENV180007984
FLSB01002099
297606
Actinomycetota
CCT
Arg
>WENV180007985
FLSB01002099
297606
Actinomycetota
CCT
Arg
>WENV180008165
FLSB01004360
371116
Actinomycetota
GGC
Ala
>WENV180008249
FLSB01008701
371116
Actinomycetota
GGC
Ala
>WENV180008500
FLSB01044679
371116
Actinomycetota
GGC
Ala
>WENV180008707
FLSB01110202
176317
Actinomycetota
GAT
Ile
>WENV180008845
FLSB01179316
442299
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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