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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180016045
FSTY01000310
400295
Actinomycetota
GAC
Val
>WENV180016050
FSTY01000381
283405
Actinomycetota
CGT
Thr
>WENV180016058
FSTY01000460
283405
Actinomycetota
CGT
Thr
>WENV180016038
FSTY01000230
177601
Actinomycetota
CAT
Met
>WENV180016051
FSTY01000395
177601
Actinomycetota
CAT
Met
>WENV180016031
FSTY01000044
177967
Actinomycetota
TGG
Pro
>WENV180016047
FSTY01000327
177967
Actinomycetota
TGG
Pro
>WENV180016048
FSTY01000358
480969
Actinomycetota
TCC
Gly
>WENV180016054
FSTY01000416
400457
Actinomycetota
CTG
Gln
>WENV180016069
FSTY01000686
400457
Actinomycetota
CTG
Gln
>WENV180016042
FSTY01000291
282628
Actinomycetota
CTT
Lys
>WENV180016052
FSTY01000410
281661
Actinomycetota
TAC
Val
>WENV180016056
FSTY01000445
56310
Actinomycetota
GGA
Ser
>WENV180016037
FSTY01000216
73525
Actinomycetota
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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