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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180016228
FSUF01001537
283405
Actinomycetota
CGT
Thr
>WENV180016199
FSUF01000354
177601
Actinomycetota
CAT
Met
>WENV180016201
FSUF01000558
177601
Actinomycetota
CAT
Met
>WENV180016230
FSUF01001577
177601
Actinomycetota
CAT
Met
>WENV180016196
FSUF01000304
56309
Actinomycetota
GAG
Leu
>WENV180016237
FSUF01001676
332531
Actinomycetota
GTT
Asn
>WENV180016185
FSUF01000022
501346
Actinomycetota
CCC
Gly
>WENV180016211
FSUF01000985
345086
Actinomycetota
ACG
Arg
>WENV180016205
FSUF01000808
306953
Actinomycetota
CTC
Glu
>WENV180016198
FSUF01000331
413438
Actinomycetota
TTG
Gln
>WENV180016184
FSUF01000001
298510
Actinomycetota
TTT
Lys
>WENV180016190
FSUF01000129
283097
Actinomycetota
CGT
Thr
>WENV180016231
FSUF01001582
177969
Actinomycetota
CGG
Pro
>WENV180016191
FSUF01000181
290589
Actinomycetota
CCG
Arg
>WENV180016214
FSUF01001067
290589
Actinomycetota
CCG
Arg
>WENV180016235
FSUF01001663
281661
Actinomycetota
TAC
Val
>WENV180016186
FSUF01000096
227514
Actinomycetota
CAT
Met
>WENV180016209
FSUF01000947
315977
Actinomycetota
CTT
Lys
>WENV180016203
FSUF01000618
185273
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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